Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00136 ATGGAATATCTAGGGATTGATCTGAGCTGCGCCGTGGGATCCCTCCGCAACGGCAACTTTCCCGACAAGGATTGCTTGCTCCCTCTCATTTCCAAACTTCTCGGTTACGCCATCGTCGCCGCTTCCACCACCGTCAAGCTCCCTCAGATTTTGAAGATTCTGAAGCATCAGAGTGTGAGAGGTCTTAGCATGATATCCTTCGAGCTTGAAGTTGTTGGATATACCATCGCCTTGGCTTACTGCCTCAGCAAAGGCCTTCCGTTTTCGGCTTACGGAGAGTTGTTGTTTCTTTTGATCCAAGCTTTAGTATTGGTTTCTGTAATCTACTACTATTCTCGACCTCTGAAGACAATAACATGGATCCGGGCATTGCTATATTGTGCTGTAGCACCCACTGTCTTAGCTGGTCAAATTGATCCTCTCCTCTTTGAAGCTCTGTATGCATCCCAGCATGCAATCTTTCTCTTTGCGAGGATCCCACAAATATGGCAAAACTTTTCTAACAAAAGTACAGGGGAACTCAGCTTCTTAACTTGTTTTATGAATGTCGGAGGTTCGATGGTTAGAGTATTCACCACCATCCAAGAAAATGCACCCAAAACTGTTCTATTGGGCTATGTAATTGGTTTCGCAACAAATTTTACCATCTTAAGTCAGATAATAGCATACCAAAATCCTCGGGTGTCACTGCATCCAATCCACACGCAGAATTTTGTCACTCTTCAATCGACTCATAGAACATTACCTTATCTCAAGTTTCAACTGCTGATACGTGGACCATCTGAAGGTAGTCAGCAGTGCAAAATTAACAGGATTTTCTCTATTCCCGGCCAATCTATCAGAAGGGCGATGCCATGTCATAGTAACCTGATGAATATCTATCTCATCGGCTGGTGA 897 0.4415 MEYLGIDLSCAVGSLRNGNFPDKDCLLPLISKLLGYAIVAASTTVKLPQILKILKHQSVRGLSMISFELEVVGYTIALAYCLSKGLPFSAYGELLFLLIQALVLVSVIYYYSRPLKTITWIRALLYCAVAPTVLAGQIDPLLFEALYASQHAIFLFARIPQIWQNFSNKSTGELSFLTCFMNVGGSMVRVFTTIQENAPKTVLLGYVIGFATNFTILSQIIAYQNPRVSLHPIHTQNFVTLQSTHRTLPYLKFQLLIRGPSEGSQQCKINRIFSIPGQSIRRAMPCHSNLMNIYLIGW 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00136 298 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 PROTEIN HOMOLOG 1 2 224 - -
Cca05g00136 298 Gene3D - 29 112 - -
Cca05g00136 298 Gene3D - 139 226 - -
Cca05g00136 298 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 2 224 IPR016817 -
Cca05g00136 298 Pfam PQ loop repeat 151 200 IPR006603 -
Cca05g00136 298 Pfam PQ loop repeat 30 89 IPR006603 -
Cca05g00136 298 SMART ctns 44 75 IPR006603 -
Cca05g00136 298 SMART ctns 156 187 IPR006603 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00136 1 223 Miscellaneous Gene Families AT4G07390 75.336 4.33e-126 357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00136 05 3203118 3211519 Cca05g00136 05 3203118 3211519 ECH