Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca05g00133 | ATGGCTGCTAGGCACATTCTGCTTCACCGCCTTCGGTGGCGTAGCTTCCAAGGGTCCACCGCGGCGGCACCTCAGAGCCACCGTCTATGGTGCAGTGCCACGTCATCACCGGAAGAACCAAACTCGAACGCAAGTTGCGGGACCCACACCTGCAGCCAGGAATACCTCGAGTGGAAGGAGAAAGAAGAGAAGATCGTGAGGGACATTCAACCAATCGTTTCGCTAACCAGGAACATTCTCTACTCGCCAAGGTACATGAACGGGGAGCATTTGAGTATGGAGGACGAAAGAGCCGTGGTGGAGAACGTTCTCATTTACCATCCGCATTATGAAGATAAAATCGGAAGTGGCTTGAACTCCATTATGGTTGATCATCATCCCTTATATTTATACCCAAGGTGCCTTTTTGTTGTAAGAACTGATGGTAGCTGGATCGACTTCTCCTATCGGGTGTGCCTTGAGGAATACATTAAAAATAAGTACCAAATAAGTGCTGAAAGGTTTGTTAATAAAAGGTTTCTTAAAAATCTTATTAAGCATTGGGGTATTTGA | 552 | 0.4674 | MAARHILLHRLRWRSFQGSTAAAPQSHRLWCSATSSPEEPNSNASCGTHTCSQEYLEWKEKEEKIVRDIQPIVSLTRNILYSPRYMNGEHLSMEDERAVVENVLIYHPHYEDKIGSGLNSIMVDHHPLYLYPRCLFVVRTDGSWIDFSYRVCLEEYIKNKYQISAERFVNKRFLKNLIKHWGI | 183 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca05g00133 | 183 | Pfam | Protein of unknown function (DUF3223) | 78 | 153 | - | - | |
| Cca05g00133 | 183 | Gene3D | - | 60 | 179 | - | - | |
| Cca05g00133 | 183 | PANTHER | - | 8 | 175 | IPR044673 | - | |
| Cca05g00133 | 183 | PANTHER | DCL PROTEIN (DUF3223) | 8 | 175 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca05g00133 | Cca-Chr5 | 3160193 | 3166057 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca05g00133 | 05 | 3160193 | 3166057 | Cca05g00133 | 05 | 3160193 | 3166057 | ECH | |
| Cca05g00133 | 05 | 3160193 | 3166057 | Cca07g00479 | 07 | 6468312 | 6474793 | PCT |