Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00130 ATGGCGGTGATTTCCGTCGTGTCATGGTTTTTGTTCATTTTTCTATCAGCCCAGAGTGGTTTATGTTCAGTTCCGAGGGACATTTTCGTTCTGGCGGGACAGAGCAACATGGCTGGACGAGGTGGCGTTGTCGGGGGGAAATGGGACGGCAATGTCCCTCCGGAGTGCAGGCCCGGCCCGCGTATTCTGAGGCTAAGTGCGGGCCTGAAGTGGGAGGAGGCCCGGGAGCCTCTGCATGCGGACATCGACGTGGCGAAGACATGTGGCGTTGGGCCCGGGATGGCTTTCGCGAAGGAGGTTGCGAAGGGTGGTGGTGGGCCTGGGTGGGTGGGCCTTGTCCCTTGCGCCGTGGGTGGGACCAAGATTGGAGAGTGGAGTCGAGGGTCGAGGTTGTACAATGAGTTGGTGCAACGCGCGGTGAGCGCAATTGGGGATGGTGGTGCACTCAGAGCGCTTGTTTGGTACCAAGGGGAGAGTGACACGGTGAGAGAAGAAGATGCTGAGGCTTATAAGGGTAGAATGGAGAGGCTTATTATGGACCTTCGCTCAGATCTTCACCTTCCCTCTCTACTTGTTATACAGGTTGCACTTGCATCAGGGGAAGGGAAATTTATAGAGAAGGTGAGGCTTGCTCAAATGGGAATAACATTGCCTAACGTAAAGTGTGTAGATGCTAAGGGACTGAGTCTGAATCCAGATAAACTTCACCTCACCACCATGTCTCAGGTTCATTTGGGTATTCGATTAGCACGTGCCTATCTCGCTTCAACCAATCACCATTACCAATTCAATTGTAACATGAAGAATCATACGCAAGTTTTAGCTAGCTGA 831 0.5283 MAVISVVSWFLFIFLSAQSGLCSVPRDIFVLAGQSNMAGRGGVVGGKWDGNVPPECRPGPRILRLSAGLKWEEAREPLHADIDVAKTCGVGPGMAFAKEVAKGGGGPGWVGLVPCAVGGTKIGEWSRGSRLYNELVQRAVSAIGDGGALRALVWYQGESDTVREEDAEAYKGRMERLIMDLRSDLHLPSLLVIQVALASGEGKFIEKVRLAQMGITLPNVKCVDAKGLSLNPDKLHLTTMSQVHLGIRLARAYLASTNHHYQFNCNMKNHTQVLAS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00130 276 Gene3D SGNH hydrolase 24 256 IPR036514 -
Cca05g00130 276 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 5 258 - -
Cca05g00130 276 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 26 254 IPR005181 -
Cca05g00130 276 SUPERFAMILY SGNH hydrolase 27 259 - -
Cca05g00130 276 PANTHER OS06G0729725 PROTEIN 5 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00130 Cca-Chr5 3015062 3017323 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00130 05 3015062 3017323 Cca05g00130 05 3015062 3017323 ECH
Cca05g00130 05 3015062 3017323 Cca07g00483 07 6584852 6587489 PCT