Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00115 ATGGAGCGCAAGCAAGGCTTCTTTTCCGCGCTGAAGGACGAGGTGGTCCGCGGCCTCTCGCCGGCGCGGTCACGCGCCAAGAGCCCGGCGAGGAGCGCGTCGCCGATGTCCTCGCTGCTccgccgccggcgcaagcagcacgcgccgccgccgGAGCTCTTGATGGCGAGATCGGGAAGCCTGCGGCCCGCGGAGGCCCTCTCGCCGCTGAAGGAAGGGCCCGACGGCACCGACGGGCAGGACTCCAGGCGCGGCGAGGGAAGGTGGGGCCACTGGATGAAAGGACCACTGGCGAGAACACCCTCCGTTTCCTCGTCCTCTTCCTCGTCCTCCTCTTGCAAGAAGTCCGATCTGAGGTTGCTCCTCGGCGTGTTGGGCGCTCCACTCGCCCCTGTCCACGTGTGCACCACCGACCCCTTCCCTCACCTCAGCATCAAAGACATCCCCATTGAGACTTCTTCTGCGCAGTACATTCTGCAGCAGTACATTGCGGCTTCTGGAGGGCAGAAGCTTCAGAATTCGATTAACAATGCCTATGCCATGGGGAAGGTGAGGATGATAGCGTCCGAGTTCGAGACGGCGAACAAGGTCACGCGCAGCCGGAACTCCTCCAAGGCTGCTGAGTCTGGTGGGTTTGTCTTGTGGCAGATGAACCCCGACATGTGGTATGTGGAGCTTGCTCTTGGTGGCAGCAAGGTTCACGCCGGTTGCAATGGGAGACTCGTCTGGCGCCACACGCCCTGGCTCGGCGCCCACGCCGCCAAAGGGCCTGTTCGGCCGCTGCGTCGCGCCCTTCAGGGTCTTGACCCAAGAACAACTGCTAGCATGTTTATCAATGCAAGATGCATTGGGGAGAAGAAGATAAATGAAGAGGACTGTTTCATCCTCAAGCTTTGTGCAGACCCCTCAACGTTGAAAGCCAGGAGTGAAGGTCCAGCAGAGATCATAAGGCATGTTCTGTTTGGGTACTTTAGCCAGAAAACGGGGCTTCTTGTTCACTTGGAGGACTCCCATTTGACCCGCATTCAGAACAACGGTGGTGATGCAGTATATTGGGAGACCACAATAAATTCGTTTCTCGATGATTACAGACCTGTTGAGGGGATAATGATTGCTCACTCAGGTCGTTCTGTAGTGACGCTTTTCAGGTTTGGGGAAACGGCAATGAGCCACACTAAAACAAGGATGGAAGAGGCTTGGACGATTGAGGAGGTTGCATTCAATGTTCCTGGCCTTTCTTTGGACTGTTTCATTCCTCCATCTGAGTTAAGGTTTGCTTCTATGAGTGAAGCCTGTGAGCTTCCTCAAGGTCAGAGGGTGAAGACTGCTGTG 1332 0.5488 MERKQGFFSALKDEVVRGLSPARSRAKSPARSASPMSSLLRRRRKQHAPPPELLMARSGSLRPAEALSPLKEGPDGTDGQDSRRGEGRWGHWMKGPLARTPSVSSSSSSSSSCKKSDLRLLLGVLGAPLAPVHVCTTDPFPHLSIKDIPIETSSAQYILQQYIAASGGQKLQNSINNAYAMGKVRMIASEFETANKVTRSRNSSKAAESGGFVLWQMNPDMWYVELALGGSKVHAGCNGRLVWRHTPWLGAHAAKGPVRPLRRALQGLDPRTTASMFINARCIGEKKINEEDCFILKLCADPSTLKARSEGPAEIIRHVLFGYFSQKTGLLVHLEDSHLTRIQNNGGDAVYWETTINSFLDDYRPVEGIMIAHSGRSVVTLFRFGETAMSHTKTRMEEAWTIEEVAFNVPGLSLDCFIPPSELRFASMSEACELPQGQRVKTAV 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00115 444 Pfam Protein of unknown function (DUF620) 179 420 IPR006873 -
Cca05g00115 444 MobiDBLite consensus disorder prediction 99 113 - -
Cca05g00115 444 MobiDBLite consensus disorder prediction 1 113 - -
Cca05g00115 444 MobiDBLite consensus disorder prediction 76 90 - -
Cca05g00115 444 PANTHER LIPASE 1 444 - -
Cca05g00115 444 PANTHER LIPASE 1 444 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00115 Cca-Chr5 2640847 2643036 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00115 05 2640847 2643036 Cca05g00115 05 2640847 2643036 ECH