Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00113 ATGGAGCTCCTAACCTCCATGGTAGAATTTTATGGCATGGCGTGCCTGGTGCTTTTTGTCATTATCTTGCCCTTATACCTCAGTAAGGTCACCAGCGACACTCGCCGCACGCCAAAAGTTTGCGTCCACCGCGAACCGCTTTCTCATGCCGAACGGTTGACGGTTCAGCCCGCTCAAAGCAAGAGCAAGGTCGGTTCTGTTAATCCGGTTCAAGCTGCCACGTGCCTCCAAACGAAACGCGATATACACGAGGCGGTTAGTTCTGTTCCCACGGTCGAATCCGATTCCAATGTTACTGTGGACTCAGACCCTGACATTGCCGTTAAAGATGAAATCGTCGAGCCTGACGAGAAGAACATGGAAAGtgctgctgctgatgatgatgatgatTGGGAAGGGATTGAGAAGAGTGAGGTGGAGAAAGAGTTTATGGCGGCTACGGAATTCGTTAGTGGAGAGGGTAATAGATTGGAAAGTGTTGGAAGCAACGTGCAAATGGAGCTGTATGGGCTTCACAAGGTTGCCATCGAAGGACCTTGCTGTGAACCTCCGCCAATGCCTCTCAAGCTCTCTGCACGTGCCAAGTGGAATGCTTGGCAaaagctggggaacatgagtccagaggttgcaatggagcagtatatcagccttctttcagataaatttccgggatggatgaaagatccttctgctGGAATGAGTGAACATGAACCCACAAGACCTGAAGTTTCCGACTCTGCTGCTTCTGATATAAGCACAACTTTGTCTCATCAACAAATGATCATAACTGAAAGCAGGGAACTTGAACAAGTGTCTGATTTCAAGGATCACAACCCACTTACAGAATCAGATTTGGAGAACAATGTTAATAAATGA 876 0.4167 MELLTSMVEFYGMACLVLFVIILPLYLSKVTSDTRRTPKVCVHREPLSHAERLTVQPAQSKSKVGSVNPVQAATCLQTKRDIHEAVSSVPTVESDSNVTVDSDPDIAVKDEIVEPDEKNMESAAADDDDDWEGIEKSEVEKEFMAATEFVSGEGNRLESVGSNVQMELYGLHKVAIEGPCCEPPPMPLKLSARAKWNAWQKLGNMSPEVAMEQYISLLSDKFPGWMKDPSAGMSEHEPTRPEVSDSAASDISTTLSHQQMIITESRELEQVSDFKDHNPLTESDLENNVNK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00113 291 MobiDBLite consensus disorder prediction 245 266 - -
Cca05g00113 291 Gene3D - 133 240 IPR014352 -
Cca05g00113 291 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 80 283 - -
Cca05g00113 291 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 139 227 IPR000582 GO:0000062
Cca05g00113 291 MobiDBLite consensus disorder prediction 268 282 - -
Cca05g00113 291 SUPERFAMILY Acyl-CoA binding protein 139 226 IPR035984 GO:0000062
Cca05g00113 291 MobiDBLite consensus disorder prediction 228 291 - -
Cca05g00113 291 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 3 80 283 - -
Cca05g00113 291 Pfam Acyl CoA binding protein 140 218 IPR000582 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00113 Cca-Chr5 2601748 2606985 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00113 50 227 Acyl Lipid Metabolism Gene Families AT4G24230 42.697 1.03e-37 135