Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00090 ATGCATACGCTGAACCCTTTTGTTTGTGGCACATTCCATGATGATTATTATGATGAACCATGTCTTGCAAGTCCAGGTTCTAGCCCCAGAAAATATAAAAGAAAATATAGCAGAAACAATAACCCTTATTCCGCACGTGGCCTTGATAAGTTTTCAGCACTTTTGGCCGATCTTGATGTGAAGAGGCAGTATATATATTCTCAAATGAACCCTCATGAGATCTCTTTCGTTCGCTTTGTGTACAATCACACAGATGATATAGTTCCCGTAGTGGTCAAGGtcaagaacagcaagaatcagaaacgcaagagccaagaactcaaAGTGGTGAGAGCAAGAACGTTTAATCACACTTCAGAAGAGATATCATTGGAAGAGTCTTCACCAGCCGATGATCAAAACTCTTCTGAAGAAAGAAAGAAAACCAAGATAGACACTATTCATCATCATACAAAGGTAGCTAAGAGTATCAACATTTCTTGGAAGATGAAGAACCCTTGGGACGTGGGGATGCCTTCTTTCTACTTGCCATTGGTCATAATAATGATTTTGTTGCTCTTGTTGGTGTTTGGTAGATCTGTTACAATTCTTTTCACGTGTATTATGTGGTATATGATCTCCATGTTCAGGACTATTCCTCCGAAGAACTTGAGGAAGTCAATGAAGAATAAGGAGGAACGTGTTAGAGGGTCGAGTAGTAGTGGTGGAAAGAAGATTGTGAGCAATGCAGGGGCCAAGAAGAAGGAGTATGTGAGAGGGATGAGTGAGAAGATGGAGGTGGGTGAAGGGAGCAAGAAGAAGGAGTTCTTGAGAAGGTTGAGTGAGAGGAAGATGGAGGTGGGTGAAGGGAACAAGATTAAGAAAGAGTTAGTTAGATGGTGGAGTGAAAAGAAGATGGTGGTGAGTGAAGGGGGCAAGAAGTTCTTGGATTGTGTTAGAGGGGAGAGTGAAAAGAAGATGGTGGCGGGTGCAGGGAGCAAGAAGTTCTTGGATTGTATTAGAGGGGAGAGTGGTGCTGATAGGTTACGTAATTCTCCAAGAAGTTCTCCAAGAAGCGGTGCTGATTCTCCAAGAAGTGGTGCTGATTCTCCTAGAAGTGGTGCTGATTCTGAGGATTCCaagaacaagaagaagaagaagGGTTCAAAAGATAAGAATTCACCAAAGAAAGACTAG 1176 0.4014 MHTLNPFVCGTFHDDYYDEPCLASPGSSPRKYKRKYSRNNNPYSARGLDKFSALLADLDVKRQYIYSQMNPHEISFVRFVYNHTDDIVPVVVKVKNSKNQKRKSQELKVVRARTFNHTSEEISLEESSPADDQNSSEERKKTKIDTIHHHTKVAKSINISWKMKNPWDVGMPSFYLPLVIIMILLLLLVFGRSVTILFTCIMWYMISMFRTIPPKNLRKSMKNKEERVRGSSSSGGKKIVSNAGAKKKEYVRGMSEKMEVGEGSKKKEFLRRLSERKMEVGEGNKIKKELVRWWSEKKMVVSEGGKKFLDCVRGESEKKMVAGAGSKKFLDCIRGESGADRLRNSPRSSPRSGADSPRSGADSPRSGADSEDSKNKKKKKGSKDKNSPKKD 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00090 391 MobiDBLite consensus disorder prediction 342 356 - -
Cca05g00090 391 MobiDBLite consensus disorder prediction 120 145 - -
Cca05g00090 391 MobiDBLite consensus disorder prediction 220 239 - -
Cca05g00090 391 PANTHER ZCF37 4 258 IPR045880 -
Cca05g00090 391 MobiDBLite consensus disorder prediction 336 391 - -
Cca05g00090 391 PANTHER ZCF37 4 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00090 Cca-Chr5 2028509 2029696 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00090 05 2028509 2029696 Cca05g00090 05 2028509 2029696 ECH
Cca05g00090 05 2028509 2029696 Cca03g01798 03 37192020 37193563 PCT