Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00088 ATGGCGAATAACTCAAGCGACGCACGTGTTCCTTCCTTCACCGATTTCCCGGAGGACATTCAGGTCTGCATCCTCTCGTTATTGGGCCCATCCGAGATCGCCACCCTGGCCTGCACCTCCAAGCGATTGGGCCTCCTCTGCGCCCACGACTCCAAGCTGTGGTTCAGTATGTGCGAGCGCAGGTGGGGTTCCTGCACCCGCATCGCCCAATGGGGCAAGGGCAGGGGCACAATCTCCTACAAGCACCTCTACAACACCCTCCACCACTGGGAGAATCTCCTCGGCTTCTGGCGCCGGAGCGGCACCGCCACGGGAACCCCTCCCTTGCTCTTCTTCGAGTGGGGCCCATCCTTCATCTCCGCTTCTAGGGTTTCCCCTTCCGATTTCGCCTCCTACGCCGTCACCAAAACGCCCTTCCTCTCGATGACGCTCTCCGAGGAGGGACACGTGGCGTGCTATCTCGATCCCGATGGGAAGCGAGGGTTTCAGAACGAGTTGGTTGCGGTGGATGTTTGCTTCATGGGGAAGACGCACTTTGTGGTCGAGGGGAAGGATTACAGGAGTTCGGCCAGTGGCGATGATTGCGGAGAggaggcggcggcggcggcggcggaggtggAGAGTGGTTCCCCGCCGGAGAAGGTCATGGCGGAGATTTACCAGCATTTCGCGAACCGGCGGAGCCCCGGCGGGGACCGGTCCCGGAGGCAGAGGCGCCGGGAGAAGGAGAGGCTCGCGAGGAGGAGGAGATTGGAGCCTCAGCATTTTGTTAAGATTGTGAATTGCTCGCCGACTCCGGCGAGGCCCTTGCAGGGTCTCTGGAAGGGAATTTGTGATGACATGAGTTTGGCATTTTACCTGGTGGTGTATGATGATATTGGAGGCATTGCCTGCCGGCGGATTGGGGATCCTCCAGAACATTTTTCAGTATCCGGACATGCACCACCAGTGTTCTGGACGTCAAATGCTACATTTCTGGAATCTCCCTTTTCTCCAGAGGAAGAGTCTTTGTATGACAGTCGAGTTCATCTTCAACCACTTCAACCAAGCAATGAAATTCTTGAGCAATTCCCTTTGTTGGATGGTGAAGTGGTAAACCGAATGCAGCAGATCCTGTTATCAGACAATGTGGTAAACCGAATTCTGCATATAAGCTCAAGTTATGATTTAGTTGTTCCAGACCTTGCTGGGACAATAAATCCAAGGAGTGCAGAGGGAAGGATTTGGCAGTACCAGAATGGTACTTTTGGTTTTGGATTCCTTTCGGATAATTTTGTAGTTGACATGAAACATATCATCCACAATGGTTGTATTGTGGATGCTGTAAATTCTTCTTCTGATTGA 1344 0.5223 MANNSSDARVPSFTDFPEDIQVCILSLLGPSEIATLACTSKRLGLLCAHDSKLWFSMCERRWGSCTRIAQWGKGRGTISYKHLYNTLHHWENLLGFWRRSGTATGTPPLLFFEWGPSFISASRVSPSDFASYAVTKTPFLSMTLSEEGHVACYLDPDGKRGFQNELVAVDVCFMGKTHFVVEGKDYRSSASGDDCGEEAAAAAAEVESGSPPEKVMAEIYQHFANRRSPGGDRSRRQRRREKERLARRRRLEPQHFVKIVNCSPTPARPLQGLWKGICDDMSLAFYLVVYDDIGGIACRRIGDPPEHFSVSGHAPPVFWTSNATFLESPFSPEEESLYDSRVHLQPLQPSNEILEQFPLLDGEVVNRMQQILLSDNVVNRILHISSSYDLVVPDLAGTINPRSAEGRIWQYQNGTFGFGFLSDNFVVDMKHIIHNGCIVDAVNSSSD 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00088 447 MobiDBLite consensus disorder prediction 226 247 - -
Cca05g00088 447 Pfam F-box domain 14 50 IPR001810 GO:0005515
Cca05g00088 447 Gene3D - 2 98 - -
Cca05g00088 447 SUPERFAMILY F-box domain 5 91 IPR036047 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00088 05 1996530 1998772 Cca05g00088 05 1996530 1998772 ECH