Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01969 ATGTTCAAGAAGGCGGTGGAGGCGAAATCTCACCAGAGATTGTCTGGTGCGGACAGGAAGAAGCTGAGACGAAGCATCAAGGACAAATTCCAAAGGGCTTCTGATTCCGACTTGGACGCCTTGCTTCCTCCCAAGGCAGAGATAACAGTGTCCAAGTTTCAAAACCGTGTCCATGTATATTCCGTGGAAGGAGGCTTTCCAATGTTTTTCGACGTTGATGGCCGCGGCTCAGACATTTTCCCAACAGTTTATGCACTGTGGATGGTCCCTGAGTTGCTGCCTGTTTTCGTGCTGAAGGGTGGTGAGGTTTCCCGGTTTGTTATCGGTGGTGCAGACTTGATGTTCCCTGGTATAACTGTGCCTCCCGAAGGACTTCCTTCTTTTGTAGCAGGGGAACCTTGGGCCGTCAAAGTACCCGGAAATCCTGCTCCCATTGCGGTTGGGAGTACTACAATGAGCAGTGCGGAAGCATTAAAAGCGGGTTTACGTGGAAAGGCGCTAAGAATAACTCATTACTATCGTGATTTGCTTTGGGAATCTGCTGAGGGCCGCCATGTGCCTAATGCAGGTTTTTTTGAAGATGTTGTGTATGAGGATCCTTCTTTGTTACCAGCATCTCATGATTCTGATTTGACTGAGGTTGCTGGTGGTGAGACATCAAATGATCAGCAGAAAAACCTAAAAGGCGATGGAGCGGAGGAGTCTCAGGATGTAAATGAGTTACAACCTGACTCCACCTCCACATTGACAGCACCAAATGACAATGAAGATGATACTGCAGCTGAAGTAACTGAAGGCGTATCTGATTTGAAGTTAACGGATACTGCCACTGCTAGTGACCCTAATGACCAGCATACTCTATCGACTGCAGACATAGATTCTCTGTTAGATAAGTGCCTTCTGCAAGCCTTGCACACAACAGTGAAGGACAAAGACCTTCCCATGCCTGGAAGCACTCTATGGTCAAATCATGTATTGCCATGCAGGCCTTCAGGAATTACTTTAGACATCAAGAAATCTTCCTACAAGAAGTTGTCAAAGTGGTTACAAGCAAAATCCACGTCTGGCTGGATATCAGTAAAAGAAGATAAACACAAAAAGGAAGTCATGCTATTTTCAGTAAACCGAAATCATGCTGATTATTCTTCGTTTAAGCCTGAAAAAAGGCGGGTGGAGAAGAGTGAGCAGCCCAGTGTTCAATCTGCCAATGAAATTCATTCGTCCAAAACTCTTGAAGTGGTTGAAATCTACAAGCCAAGTGTACATGTCAATTCCATATTTTCATCTGTGGGAGCTGACACAGGGAAACTTTTTAGTGCTTCTGAAGCTACCGAAATTGTCTTCAAATATGTTGAAAAAGAAAATCTTGTGAAACCAACTAATAAATCCATTGTGATTCTTGATGCCATATTATGTGATGCACTGTTCAAGGGGGCTATTAAAAAAGGAACAACATATCCTACAGAAATTCACAAGAAAGATTTAGGATCAACATTTGTGAGTCGTATGCAGCCTCACCATGTTGTCACCAGAGGAAATGAATCTGTAGTTCGTAAAGGTGCACTTAAAACAATTCAGTTACTGACAGAACGTCGTCAAGGCAACAAGAAAGTAACCAAACTCTCTGGTATGGAAACTTTTCTTATAGATGCTGAAGCGTTGGCATCAGAACTGCAAAAGAAGTTTGCTTGCAGTACCACTGTTGCAGAACTACCAGGTAAGAAAGGGCAAGAAGTTTTGGTTCAAGGAGGAGTTATTGATGACCTAGCTAGGCATTTGATTGAACAATATGGAGTTCCTAAGAGATACATTGAAGTTCTTGATAAAACCAAGAGATGA 1839 0.4334 MFKKAVEAKSHQRLSGADRKKLRRSIKDKFQRASDSDLDALLPPKAEITVSKFQNRVHVYSVEGGFPMFFDVDGRGSDIFPTVYALWMVPELLPVFVLKGGEVSRFVIGGADLMFPGITVPPEGLPSFVAGEPWAVKVPGNPAPIAVGSTTMSSAEALKAGLRGKALRITHYYRDLLWESAEGRHVPNAGFFEDVVYEDPSLLPASHDSDLTEVAGGETSNDQQKNLKGDGAEESQDVNELQPDSTSTLTAPNDNEDDTAAEVTEGVSDLKLTDTATASDPNDQHTLSTADIDSLLDKCLLQALHTTVKDKDLPMPGSTLWSNHVLPCRPSGITLDIKKSSYKKLSKWLQAKSTSGWISVKEDKHKKEVMLFSVNRNHADYSSFKPEKRRVEKSEQPSVQSANEIHSSKTLEVVEIYKPSVHVNSIFSSVGADTGKLFSASEATEIVFKYVEKENLVKPTNKSIVILDAILCDALFKGAIKKGTTYPTEIHKKDLGSTFVSRMQPHHVVTRGNESVVRKGALKTIQLLTERRQGNKKVTKLSGMETFLIDAEALASELQKKFACSTTVAELPGKKGQEVLVQGGVIDDLARHLIEQYGVPKRYIEVLDKTKR 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01969 612 CDD eIF2D_C 525 607 IPR039759 -
Cca04g01969 612 MobiDBLite consensus disorder prediction 383 402 - -
Cca04g01969 612 Pfam Pre-PUA-like domain 2 90 IPR041366 -
Cca04g01969 612 MobiDBLite consensus disorder prediction 238 257 - -
Cca04g01969 612 ProSiteProfiles Translation initiation factor SUI1 family profile. 525 597 IPR001950 GO:0003743|GO:0006413
Cca04g01969 612 ProSiteProfiles PUA domain profile. 93 174 - -
Cca04g01969 612 MobiDBLite consensus disorder prediction 203 259 - -
Cca04g01969 612 Pfam Translation initiation factor SUI1 523 600 IPR001950 GO:0003743|GO:0006413
Cca04g01969 612 SUPERFAMILY SWIB/MDM2 domain 409 509 IPR036885 -
Cca04g01969 612 SUPERFAMILY PUA domain-like 103 179 IPR015947 -
Cca04g01969 612 Gene3D - 1 186 - -
Cca04g01969 612 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2D 1 612 IPR039757 GO:0001731|GO:0003743
Cca04g01969 612 ProSiteProfiles SWIB/MDM2 domain profile. 415 501 IPR003121 -
Cca04g01969 612 Gene3D - 521 607 - -
Cca04g01969 612 MobiDBLite consensus disorder prediction 1 22 - -
Cca04g01969 612 SUPERFAMILY eIF1-like 490 608 IPR036877 GO:0003743|GO:0006413
Cca04g01969 612 CDD eIF2D_N 9 81 - -
Cca04g01969 612 Gene3D SWIB/MDM2 domain 406 492 IPR036885 -