Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01920 ATGGTTTCTGCTGTTAGTTTCAGTCAAAGCCTCGTTTTCTTGAAGCCATCATCTCAGGTGAAGTGTTGCACACAGTCACAGAACAAAGCAGCCACATCACATATTCAAACGAAGAAACGGTGCTTGAGATGCAACACCCTTTACTCAGATCAAGATAATTCTCCACATGCTTGCTCCTTCCACGGCCACACCAATGAGCACAAGAAGGATGTTAGTTTTTTAACCAGCTTACCAGGAGCATCTCAAAGGCTACAAATTCACAGTGCTGATCTCAGCAATCCAGAAAGTTTCAATGCAGCCATTGAAGGGTGCATTGGAGTTTTCCATGTAGCTACCCCAGTTGACTTTGAATTAGATGAACCTGAGGAGGTAGTGACCAAAAGATCCATTGATGGTGCACTTGGCATTTTGAAGGCATGCCTCAATTCCAAGACTGTGAAACGAGTTGTTTACACCTCTAGTGCCTCTGCTGCGGCTTTCAATAACAAGGAAGTGTTGGATGAAAGCTGTTGGAGCGACGTGGATAGTCTTAGAGCTgCTTCAAAGCCATTTGGTTGGTCCTATGCGGTTTCAAAGACATTGACAGAAAAGGCAGTGCTTGAATTTGGAGAACAAAATGGATTGGATGTTGTCACACTAATTCCAACTTTTGTGTTTGGACCCTTCATTTGTCCAAAGCTTCCTAGCTCGGTTCAAGCTTCCTTGTGTTTTGCATTTGGAGGAAAAAGTGCCTTTGGTTTCATAATTCAAACACCTATGGTGCATGTAGATGACGTGGCTAGAGCACATATATTTCTGCTGGAACATCCTAATCCAAAAGGGAGGTATAGTTGTTCACAGTGTCTGGTAACTTTTGAAAGAATCTCTGAACTTGTTTCTGCCAAATATCCAGAATTTCAACTAGAGACAGTAGACTCGTCCAAGCAAATTGAAGGTATCAAGATACAAGATTTGTCTTCAAAGAAACTGAAAGATGCTGGATTTGTGTTCATGTACGGACTTGAGGAAATGCTTGATGATGCAATCCAATGCTGCAAACAAAAAGGGTTACCTGTGAGGTAG 1062 0.4218 MVSAVSFSQSLVFLKPSSQVKCCTQSQNKAATSHIQTKKRCLRCNTLYSDQDNSPHACSFHGHTNEHKKDVSFLTSLPGASQRLQIHSADLSNPESFNAAIEGCIGVFHVATPVDFELDEPEEVVTKRSIDGALGILKACLNSKTVKRVVYTSSASAAAFNNKEVLDESCWSDVDSLRAASKPFGWSYAVSKTLTEKAVLEFGEQNGLDVVTLIPTFVFGPFICPKLPSSVQASLCFAFGGKSAFGFIIQTPMVHVDDVARAHIFLLEHPNPKGRYSCSQCLVTFERISELVSAKYPEFQLETVDSSKQIEGIKIQDLSSKKLKDAGFVFMYGLEEMLDDAIQCCKQKGLPVR 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01920 353 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 79 349 IPR036291 -
Cca04g01920 353 CDD FR_SDR_e 63 328 - -
Cca04g01920 353 Pfam NAD dependent epimerase/dehydratase family 66 272 IPR001509 -
Cca04g01920 353 Gene3D - 58 350 - -
Cca04g01920 353 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 66 343 - -
Cca04g01920 353 PANTHER VESTITONE REDUCTASE-LIKE 66 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01920 Cca-Chr4 37242686 37247332 Tandem