Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01895 ATGGGTGCTGTTTGTTGTGTTGCAACCAAAGATAAAACTATACAAAGCGCATCACCCAGTGAAATCTTGCATCGGAATATTCGATATTCTCCGACATGGAACTTCCGGTGGGATCATCGAGGGCGTGTAGCTGGTGAAGATACAACTATAAATTGGTTTTCTAATGGTATTAGTGGGAATGATGGATTGGAGAATAGAAATGAATCCTCAAATGTATCTGAGGATGGAAGCCCGTTGCAGAATTATCAAAGAAATAGATGGCAAAAATCCCCAATCTCTGAAGGAACTGCTAGAAACATGTTAAATTCATCTTCGGATCAAACTATTTCAAGGAATGTCTCCACACATGTGAGCTTGGAACAGGTGAATGAGTTGGCAGAATCATCAATGGCATTGTGTCCGTATCCCACAAAACTTCCACATTCATTGCCTTCTACTTCTTTTTCAGTATCTCCTCTGCCATCCCAAAGTCACCCACTTCCATCCAGCTCAACACCATCAAGGTGGCCCTGCCATTCCACCAGTCATCAACTATCACGGCAAGTTTCTGACAGCCGAATCTTGGGATTTAAGACACCTAGTAACTTTTATGTATCTGAAGAGAGGCCAGTGTTTCCCTCATGGAGCAATGAATCTAGTATGCACTCCTACGGTGGATCTTCAGATAATTGGTCTAGGCCTGGCTTTTCTGAGCTCACAGGAACTTCCCTCAAAGAAAGATGGTCATTTGACAGTGAATCATTTGGTTTTAATTGTGAAAGGCTGGTTAGATCCAGTAGTCCCTTTTCAAATTCTCCAGTTGATTTGCAAACATGTGGTGTTTGTTCAAAACTTTTAACTGAGAAGTCTTCTTGGGGCTCCCAAAAGATGGTTGCAAGTAATGACCTTTCTGTAGTTTCTGTCCTTATTTGTGGACACGTTTATCATGCTGAATGCTTGGAGAGTTTGACACCTGAAATCAACAAGTATGATCCACCTTGCCCGGTCTGCTATTTTGGGGAGAAATATACTTTTAGGTTGTCTGAAAAAGCTCTAAAGGCTGAAATGGATTTGAAGGCTAGAACTAAGAAATCAAGAAACCGAATTGTGGACAGTGATATTGAAGATGATTCTGTTGTGTATGGACATGTTAGAGATAAAGGACGTCAAGGTAAAGGTCCCAGAGTTGATTCTAGTTCCAGTGGGAGAAACTCTAATGGGAAACCATTTTTGCGGAGACACTTCTCATTTGGCTCAAGGAGTTCCAAATGCATGCTAGATAATCAGCCATCCCGGAAGAGGGGCTTCTTTTGGGCAAAATCTAGCAAGGAATAA 1314 0.417 MGAVCCVATKDKTIQSASPSEILHRNIRYSPTWNFRWDHRGRVAGEDTTINWFSNGISGNDGLENRNESSNVSEDGSPLQNYQRNRWQKSPISEGTARNMLNSSSDQTISRNVSTHVSLEQVNELAESSMALCPYPTKLPHSLPSTSFSVSPLPSQSHPLPSSSTPSRWPCHSTSHQLSRQVSDSRILGFKTPSNFYVSEERPVFPSWSNESSMHSYGGSSDNWSRPGFSELTGTSLKERWSFDSESFGFNCERLVRSSSPFSNSPVDLQTCGVCSKLLTEKSSWGSQKMVASNDLSVVSVLICGHVYHAECLESLTPEINKYDPPCPVCYFGEKYTFRLSEKALKAEMDLKARTKKSRNRIVDSDIEDDSVVYGHVRDKGRQGKGPRVDSSSSGRNSNGKPFLRRHFSFGSRSSKCMLDNQPSRKRGFFWAKSSKE 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01895 437 SUPERFAMILY RING/U-box 271 331 - -
Cca04g01895 437 PANTHER EXPRESSED PROTEIN 1 431 - -
Cca04g01895 437 PANTHER BNAA09G43140D PROTEIN 1 431 - -
Cca04g01895 437 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 253 332 IPR013083 -
Cca04g01895 437 MobiDBLite consensus disorder prediction 144 174 - -
Cca04g01895 437 MobiDBLite consensus disorder prediction 375 407 - -
Cca04g01895 437 ProSiteProfiles Zinc finger RING-type profile. 272 330 IPR001841 -
Cca04g01895 437 MobiDBLite consensus disorder prediction 56 108 - -
Cca04g01895 437 SMART ring_2 272 330 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01895 Cca-Chr4 36365640 36371674 Transposed