Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01855 ATGAACAAAGAGCTTACAGGCTTTGTGAAGGTTTGGGAAGCAGCAGTCAGGAAATCAGCTGGTCCAAAGAAGAGGTCAAACAGCATCTTCACACCAATGTCTGTTGCCCatgttgatgatgatgatgaGTCAAGGCATGGGGATGGTGATGGGGTGTCACAGGTTGAGAAGATTCTCCCCAATGGTGACTTCTTCACAGGCCAATGGCTTGACAATGGCCCTCATGGGCAGGGAAAGTATCTCTGGACAGATGGGTGCATGTATGTTGGGGAATGGCAAAGGGGTGGCATCATGGGGAAAGGGAGGTTCAGCTGGCCTAGTGGTGCCACCTATGAGGGTGATTTCAAGGGTGGTTACATGGATGGTAAAGGCACTTACATAGGCTCTTCTGGGGACACCTACAAGGGTTGTTGGGTCATGGATTTGAGACATGGCCAGGGGACTCAGAGTTACCCCAATGGGGACTTCTATGATGGGGAGTGGAGGAAGGGGCTGCAGAATGGGCATGGGAGGTACCAGTGGAAGAATGGGAACCATTACATTGGCCAGTGGAGGAATGGTTTGTTCTATGGAAATGGGACCATGATGTGGAGCAATGGGAACAGGTATGATGGTTGTTGGGAGGAGGGGTTGCCCAAGGGGAATGGCACATTCAGGTGGGGTGATGGGAGTTTCTATGTTGGGGTTTGGAGTAAGGATCCAAAGGAGCAGAGTGGGACTTATTACCCTTCCGGCTCTTGTGCTGGCCATTTGGAGTGGGATCCTCAGGAGCTCTTCTCTGTCGACTTGGTTGATTGCATTGTTTCTGCTTGTGAGAAGGTGTCTATTTACCCTTCACAGAAGAGTTTGAGCATGTTGGAGGAGAGTAAGATGAGTAAGAAGGGCACTGAGGGTAATGGGAGGGCAAGGGGGATGTCAGTGGATGCAAGGATTAGTAATTACAGCTCTGAAGATGGCTCTTATGCATCCTATGATAGCTCAAGGAGTCCTCAGGTGAATAATTCTGTTCCAAGAGTGCCACATTTGAGGTTGAAGCCTCCAAAAAGACAGGGAGAGACTATATCCAAAGGCCACAAGAACTATGACCTCATGCTTAATCTGCAGCTTGGCATCAGACATGCTGTTGGAAGACCTGCTCCAAGTACTTCTCTTGATCTCAAGTCTTCTGCATTTGATCCTAAAGAAAAAGTGTGGACTAAATTTCCACCAGAAGGATCCAAGCACACGCCACCTCACCCATCTTGCGAATTCAGATGGAAAGACTACTGCCCGGTAGTGTTCAGGGCTCTCAGAAAGTTGTTCAAAGTAGATCCTGCTGATTACATGATATCATTATGTGGGAATGATGCCCTTCGAGAACTCTCATCCCCTGGAAAAAGTGGAAGCTTTTTTTACTTGACCAATGATGACCGATACATGATAAAGACCATGAAGAAATCAGAAGTAAAAGTTTTCTTGAGAATGCTGCCTGGTTACTATAAACATGTTCGAGCTTTTGAGAACACTCTAGTTACCAGGTTCTTTGGCCTCCATTGTGTTAAGCTAACAGGAACTGCTCAGAAGAAGGTGCGGTTTGTCATCATGGGAAATCTGTTTTGCTCACAATATGCCATCCATAGACGCTTTGACTTAAAAGGTTCAACCTTCGGTCGCACAACTGACAAACCTGAGTCAGAAATAGAGCCTACAACAACACTCAAGGACCTTGATCTAAATTACATATTTCGGTTGCGGAAGTCTTGGTTTCAAGAATTCTGCAGGCAAGTGGATAGAGACTGTACCTTCCTGGAACAGGAGAGGATCATGGATTACAGTATGTTGGTAGGTCTTCACTTCCGAGGAATGTCGTGTAATGACGCTGTTACTCCTCCTGGTTACAGTCCGGGCCCTCAAACTCCAACTGGCAATGGTAACTTTGATGATGGAGCCCCTCGTCTTTCTGGCGTGGATGTGGATCATCTTGTTGTAGATCCTAGTCGGTGGATTCAATTAGGTATAAACATGCCGGCGCGGGCCGAATTGACGTTGCGAAAAAGTTGTGACACTCCTCAGCTGGTTGGAGAACCAACAGGGGAGTTATATGAGATTATCATCTTTTTCGGAATCATAGACATTTTACAAGACTATGACATTAGCAAAAAGCTTGAGCATGCTTACAAGTCATTCCAATATGATCCAACATCAATCTCTGCGGTTGATCCAAGGCTATACTCAAGACGGTTTCGTGATTTCATCTTCAGAGTTTTTGTAGAGGACTAA 2259 0.4608 MNKELTGFVKVWEAAVRKSAGPKKRSNSIFTPMSVAHVDDDDESRHGDGDGVSQVEKILPNGDFFTGQWLDNGPHGQGKYLWTDGCMYVGEWQRGGIMGKGRFSWPSGATYEGDFKGGYMDGKGTYIGSSGDTYKGCWVMDLRHGQGTQSYPNGDFYDGEWRKGLQNGHGRYQWKNGNHYIGQWRNGLFYGNGTMMWSNGNRYDGCWEEGLPKGNGTFRWGDGSFYVGVWSKDPKEQSGTYYPSGSCAGHLEWDPQELFSVDLVDCIVSACEKVSIYPSQKSLSMLEESKMSKKGTEGNGRARGMSVDARISNYSSEDGSYASYDSSRSPQVNNSVPRVPHLRLKPPKRQGETISKGHKNYDLMLNLQLGIRHAVGRPAPSTSLDLKSSAFDPKEKVWTKFPPEGSKHTPPHPSCEFRWKDYCPVVFRALRKLFKVDPADYMISLCGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKSEVKVFLRMLPGYYKHVRAFENTLVTRFFGLHCVKLTGTAQKKVRFVIMGNLFCSQYAIHRRFDLKGSTFGRTTDKPESEIEPTTTLKDLDLNYIFRLRKSWFQEFCRQVDRDCTFLEQERIMDYSMLVGLHFRGMSCNDAVTPPGYSPGPQTPTGNGNFDDGAPRLSGVDVDHLVVDPSRWIQLGINMPARAELTLRKSCDTPQLVGEPTGELYEIIIFFGIIDILQDYDISKKLEHAYKSFQYDPTSISAVDPRLYSRRFRDFIFRVFVED 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01855 752 Pfam MORN repeat 134 155 IPR003409 -
Cca04g01855 752 Pfam MORN repeat 203 224 IPR003409 -
Cca04g01855 752 Pfam MORN repeat 111 133 IPR003409 -
Cca04g01855 752 Pfam MORN repeat 88 109 IPR003409 -
Cca04g01855 752 Pfam MORN repeat 65 87 IPR003409 -
Cca04g01855 752 Pfam MORN repeat 157 178 IPR003409 -
Cca04g01855 752 Pfam MORN repeat 180 202 IPR003409 -
Cca04g01855 752 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 446 747 IPR002498 GO:0016307|GO:0046488
Cca04g01855 752 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 21 752 IPR023610 -
Cca04g01855 752 CDD PIPKc_AtPIP5K_like 360 748 - -
Cca04g01855 752 SMART morn 132 153 IPR003409 -
Cca04g01855 752 SMART morn 201 222 IPR003409 -
Cca04g01855 752 SMART morn 86 107 IPR003409 -
Cca04g01855 752 SMART morn 155 176 IPR003409 -
Cca04g01855 752 SMART morn 178 199 IPR003409 -
Cca04g01855 752 SMART morn 63 84 IPR003409 -
Cca04g01855 752 SMART morn 109 130 IPR003409 -
Cca04g01855 752 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 346 530 IPR027484 -
Cca04g01855 752 Gene3D - 664 749 - -
Cca04g01855 752 Gene3D - 531 634 - -
Cca04g01855 752 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 151 254 - -
Cca04g01855 752 MobiDBLite consensus disorder prediction 309 336 - -
Cca04g01855 752 Gene3D - 98 139 - -
Cca04g01855 752 Gene3D - 140 190 - -
Cca04g01855 752 Gene3D - 42 97 - -
Cca04g01855 752 Gene3D - 205 279 - -
Cca04g01855 752 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 353 749 IPR002498 GO:0016307|GO:0046488
Cca04g01855 752 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 60 164 - -
Cca04g01855 752 SMART PIPK_2 387 750 IPR002498 GO:0016307|GO:0046488
Cca04g01855 752 SUPERFAMILY SAICAR synthase-like 356 749 - -
Cca04g01855 752 PIRSF PIP5K_plant 8 340 IPR017163 GO:0005524|GO:0016308
Cca04g01855 752 PIRSF PIP5K_plant 322 752 IPR017163 GO:0005524|GO:0016308
Cca04g01855 752 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 4 21 752 - -
Cca04g01855 752 MobiDBLite consensus disorder prediction 286 355 - -
Cca04g01855 752 MobiDBLite consensus disorder prediction 623 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01855 Cca-Chr4 34915459 34919212 Dispersed/Wgd