Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01840 ATGGAGAAGAAAAAGGTAGCAGTTCCCCTCGTGTGCCCGTCGTTGATCTCTTCTATAGTCCTGTTACACCCGATGCCCGATGGCTTTTTCCTCATCAGTGCAAGCAAGGGGCACAAAGGGGCTGTGTGGAGTTGTTGCTTGGATATGGTAGTTGGGAATCACATGAGGCACTCAGATCTGAAGGACACAACAGCTAGACCAGCTATACAGGATTGCAATGGCGAACGAATTGTTTCAGAATTGATTGCGGGAATTGCTATTATGTCTGAATTGGTGGCCCGTACGGGTCGGCATCAACAGCGATACGAGAACGGTTTTCGTCTTGTTGCAGGGTGTGTTCCATTTAGGTATAAAAATTCTAATGATTGTGGAGACTCTAGTTCTAATAAGATTGTTGAAGTGCTTATGATTAATTCACCAAGTGGACCAGGTCTTTTGTTTCCAAAGGGAGGTTGGGAGAATGATGAAACTGTTGAGGAGGCAGCTGTAAGGGAAGCTATTGAAGAAGCAGGAGTTCGAGGAGACCTAATGGATTTTCTTGGATACTACGAGTTTAGGAGTAAGACCCATCAAGATGAGTTCAGTCCAGAAGGTTTATGTAAAGCAGCAATGTTCGCCTTGTTTGTCAAGGAGGAACTCGAGTTATGGCCTGAGCAAAGTACCAGAAATAGGAGTTGGCTAGCTGTATCGGAGGCCCTTGGAAGCCTCCGGCATGCTTGGATGAGGGATGCACTGGAATGCTTCTGTAAATGGCATGAGGATAAGTTGATGATGACTAGAATCATGCAGTGTTCTTTCAGCAGTAATTATTATTTATTGCAGGAAACACATAAAAATGGAGTCAGCATAAGAAATGTGCATATTTTTTTTGGTATTAATAAGAGTAATGCTTGTCATACAATCTAA 906 0.4338 MEKKKVAVPLVCPSLISSIVLLHPMPDGFFLISASKGHKGAVWSCCLDMVVGNHMRHSDLKDTTARPAIQDCNGERIVSELIAGIAIMSELVARTGRHQQRYENGFRLVAGCVPFRYKNSNDCGDSSSNKIVEVLMINSPSGPGLLFPKGGWENDETVEEAAVREAIEEAGVRGDLMDFLGYYEFRSKTHQDEFSPEGLCKAAMFALFVKEELELWPEQSTRNRSWLAVSEALGSLRHAWMRDALECFCKWHEDKLMMTRIMQCSFSSNYYLLQETHKNGVSIRNVHIFFGINKSNACHTI 301
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01840 301 ProSitePatterns Nudix box signature. 150 171 IPR020084 GO:0016787
Cca04g01840 301 Pfam NUDIX domain 134 243 IPR000086 -
Cca04g01840 301 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 88 260 - -
Cca04g01840 301 SUPERFAMILY Nudix 97 252 IPR015797 -
Cca04g01840 301 PANTHER OS03G0810300 PROTEIN 88 260 - -
Cca04g01840 301 CDD Nudix_Hydrolase_9 108 242 - -
Cca04g01840 301 ProSiteProfiles Nudix hydrolase domain profile. 105 249 IPR000086 -
Cca04g01840 301 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 92 250 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca04g01840 Cca-Chr4 34347960 34358708 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01840 04 34347960 34358708 Cca04g01840 04 34347960 34358708 ECH