Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01831 ATGAGGAAACAGGTAGGAGAACTTGCCTATGGAGAGAATCTAGGAAGAAAAGAAGCTACAGAGGGGACTCATTTGTTTGATCCTCGGAATCCTCACCACACCGAAATAGCTAGGAAACAAAGGAGCGTGAATGCGATGATGTCTGGGTACGTTAGACGAGCATTCTCGTACCGAAACGTGTTGTGGCTCCGAGGCTCAGGCGCTGTTCGTGCCTGTGAGGTGTCTTCAGTTAAAATTTGCGTGTCCGAAAGTAACGGATTCTTCGCTGGTCCGGCAACGCCTAATTTCGTTGCGGAAAGTCGCAGAGCCTTTGCCAAAGGGCGAAAGTCAAAGGATGAAGGGGGTGTTGGTACAATTGAAGTTCCACCAAACGTTGGGCCTACTATTAAGGCAAATGCTGTCTCACAGATGGAGGCTGCAATGGCTGCATTATCAGCAGAGCTAAGCAAGCTACGAACAGGAAGGGCATCTCCAGGAATGCTTGATCATATTATCGTTGAAACTAGTGGTTTGAAGATGCCTTTGAATCGGGTTGCTGTTGTTTCAGTCTTAGATCCAAAAACCTTGTCTGTTAATCCTTATGATCCAGAGACACTAAAGCAATTAGAGAATGCCATTGTTTCATCTCCATTGGGGTTAAATCCTAAATCAGATGGTGAAAGATTGATTGCTGTTATTCCACCATTGACCAAAGAGCATATGCAGGCTATGACTAAGTTGGTTTCTAAATCATGTGAAGATGCTCGTCAGAGTATTAGAAGAGCTCGACAAAAGGCAATGGATGCGATAAAGAAGTTATATTCAAGTCTTCCCAAGGATGACATAAAAAGATTGGAGAAAGAAGTAACTTATATTATGCTTATTGCAGCTGATAAGATAACTGGATTCCATAGCTTTGGTAGTTTGATTTATGATATTTCCTTCTTACAGGTTGACGATTTGACAAAAAAATTTATCAAGACTGCGGAAGATGTATGCAAGGCAAAAGAAAAAGAAATTAGTCAAGGTTGA 1011 0.4224 MRKQVGELAYGENLGRKEATEGTHLFDPRNPHHTEIARKQRSVNAMMSGYVRRAFSYRNVLWLRGSGAVRACEVSSVKICVSESNGFFAGPATPNFVAESRRAFAKGRKSKDEGGVGTIEVPPNVGPTIKANAVSQMEAAMAALSAELSKLRTGRASPGMLDHIIVETSGLKMPLNRVAVVSVLDPKTLSVNPYDPETLKQLENAIVSSPLGLNPKSDGERLIAVIPPLTKEHMQAMTKLVSKSCEDARQSIRRARQKAMDAIKKLYSSLPKDDIKRLEKEVTYIMLIAADKITGFHSFGSLIYDISFLQVDDLTKKFIKTAEDVCKAKEKEISQG 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01831 336 PANTHER OSJNBA0076N16.8 PROTEIN 48 283 - -
Cca04g01831 336 Gene3D - 136 292 IPR036191 -
Cca04g01831 336 PANTHER RIBOSOME RECYCLING FACTOR 311 335 IPR002661 GO:0006412
Cca04g01831 336 PANTHER RIBOSOME RECYCLING FACTOR 48 283 IPR002661 GO:0006412
Cca04g01831 336 Coils Coil 245 265 - -
Cca04g01831 336 Gene3D - 155 229 - -
Cca04g01831 336 SUPERFAMILY Ribosome recycling factor, RRF 129 285 IPR036191 -
Cca04g01831 336 PANTHER OSJNBA0076N16.8 PROTEIN 311 335 - -
Cca04g01831 336 Pfam Ribosome recycling factor 145 285 IPR023584 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01831 Cca-Chr4 34133690 34137469 Proximal