Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01822 ATGGCAGCAACATTGGTTGGTGGTGCTTTTCTTTCTGCTTTCCTTCAGGTTGCATTTGACAGACTTGCTTCTCGTCAAGTTTTGGATTTCTTTCGTAAAAAAAAACTTGATGAGAACCTTTTGAAGAAGTTGAAGAGAAAGCTGCGATCCATCGATGCTCTTGCTGATGATGCAGAACTACAACAGTTCAGAGATCAACGTGTGAGAGCATGGCTTCTTGATGTCAAAGATGCTGTGTTTGAAGCTGAGGATTTGCTGGATGAAATTTATGAATCTCAGGCTCAAAGCATTGATAGCCAGGTGTGGAATTTCAATTTCTCTATATCTTGTGTCAGTTTGCTCAACAATAAAAATGAAATTGAAACCAAGATGACACAAGTCCTTGATGACTTAGATGAACTTGCTAACCAAGGCACTCATCTAGGTTTGAAACCCAAACTAGGCTCTTTGGAGCCTAGTTGTGTGTCACAAAAACTGCCATCAACATCTTTCATCATTGAAAGTGTTATTTATGGTAGAGATGATGACAAAAAAATCATCTTTAGTTGGCTCACATCTGACACAGACAATCATAACAAGTTATCAATACTTTCTATTGTGGGCATGGGAGGGGTGGGTAAGACCACACTTGCCCAACATGCATACAATAACCCAATGCTAGATGGTAAATTTGATATCAAAGCTTGGGTCTGTGTCTCAGATGATTTTGATGTTTTTAAGGTAACAAGAACAATTCTAGAGGCAATCACTAAATCAACTGATGATAGTAGAGACCTACAAATGATTCATGAAAGATTGAAAGAAAAATTGTCTGGAAAGAAATTTCTCCTTGTTTTAGATGACGTTTGGAATGAAGAGAAAGAGAAATGGGAAGCTGTGCATACTCCTCTAATTGATTGTGGGGCTCAGGGAAGTAGGATCCTTGTTACAACACGTAGCAAGAAAGTTGCTTCTACCATAAGGTCAAAAGAACACAACTTGACACAATTACAAGAAGATTATTGTTGGAAGCTGTTCGAGAAACATGCATTCCAAAATGCTAATCCTCCCCCAAGTCCAGACTTCAAGGAGATTGGCATAAAGATAGTTCGAAAATGTAAAGGACTTCCTCTTGCCTTAAAAACAATGGGAAGTTTATTACACAACAAGCCTATTTTGGAATGGAAAAACGTAATGCAAAGCGAGATATGGGAATTGGAGGATATTGATATTGTGCCTGCTTTAGCACTGAGTTATCACCACCTTCCTTCCCATCTCAAAAGATGTTTTGCTTACTGTGCTTTATTTCCAAAAGATTATTTGTTTAACAAGGAGTTTTTAATTCAGGTTTGGATGACTCAAAAATTTCTAGAATGTTCTCAACAAAGTAAAAGTCCAGAAGAAATTGGTGAACAATATTTCAATGATCTATTATCTAGGTCATTCTTTCAACAATCAAGTGGAAACAAAAA 1451 0.3728 MAATLVGGAFLSAFLQVAFDRLASRQVLDFFRKKKLDENLLKKLKRKLRSIDALADDAELQQFRDQRVRAWLLDVKDAVFEAEDLLDEIYESQAQSIDSQVWNFNFSISCVSLLNNKNEIETKMTQVLDDLDELANQGTHLGLKPKLGSLEPSCVSQKLPSTSFIIESVIYGRDDDKKIIFSWLTSDTDNHNKLSILSIVGMGGVGKTTLAQHAYNNPMLDGKFDIKAWVCVSDDFDVFKVTRTILEAITKSTDDSRDLQMIHERLKEKLSGKKFLLVLDDVWNEEKEKWEAVHTPLIDCGAQGSRILVTTRSKKVASTIRSKEHNLTQLQEDYCWKLFEKHAFQNANPPPSPDFKEIGIKIVRKCKGLPLALKTMGSLLHNKPILEWKNVMQSEIWELEDIDIVPALALSYHHLPSHLKRCFAYCALFPKDYLFNKEFLIQVWMTQKFLECSQQSKSPEEIGEQYFNDLLSRSFFQQSSGNK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01822 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 426 IPR027417 -
Cca04g01822 483 PANTHER DISEASE RESISTANCE PROTEIN RP 14 481 IPR044974 GO:0006952
Cca04g01822 483 Coils Coil 41 61 - -
Cca04g01822 483 Gene3D - 151 328 IPR027417 -
Cca04g01822 483 Gene3D - 329 416 IPR042197 -
Cca04g01822 483 Pfam Rx N-terminal domain 10 89 IPR041118 -
Cca04g01822 483 Pfam NB-ARC domain 180 393 IPR002182 GO:0043531
Cca04g01822 483 PANTHER OS05G0414200 PROTEIN 14 481 - -
Cca04g01822 483 Coils Coil 117 137 - -
Cca04g01822 483 PRINTS Disease resistance protein signature 196 211 - -
Cca04g01822 483 PRINTS Disease resistance protein signature 269 283 - -
Cca04g01822 483 PRINTS Disease resistance protein signature 366 380 - -
Cca04g01822 483 Gene3D - 32 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01822 Cca-Chr4 33910715 33912165 Dispersed/Proximal