Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01811 ATGGAAGAAGAGAATGCCATAGAGCTTCTCCAGAGATACAGGAGGGACAGAAGAGTGCTTCTTGATTTTATACTTTCAGGGAGCTTAATCAAGAAAGTTGTAATGCCACCTGGTGCAGTTACACTAGATGATGTGGATCTAGATCAAGTCAGTGTTGATTATGTCCTCAACTGTGCGAAAAAGAGTACAATGCTTGAACTTTCAGAAGCAATTAGAGATTATCATGATCATACTGGGTTGCCCCAAATGAGTGATACAGGTTCAGTCGGTGAATTTTTTTTGGTCACGGATCCCGAGTCTTCTGGTTCACCTCCACGGAGGCCACCACCGACTGTTCCTATTTCTGTGGTGCCTCCCGTCTCTGTTTCCACCCCTCCTCCTGTTTTTCCACAATCCCCAATTGTTTCTAATGTCTCAAGATCAGAGTCTTTTGACTCTACTCAAGAAAGGGAGCTAACTGTGgatgacattgatgactttgaggatgatgatgatgttgCGGTGGTTGAAGGCTTCAGGGCTAAAAGGACTCTTAATGATGCTTCTGATCTTGCAGTGAAATTGCCTTCTTTCTCCACAGGCATCTCAGATGATGATCTTCGTGAAACTGCATATGAGATCCTCTTGGCTTGTGCCGGAGCCACAGGGGGTCTGATTGTCCCATCaaaagaaaaaaagaaagaaaaaaaaTCCAGCTTGATTAGGAAGCTTGGGCGCAGTAAAAGTGGAAGTGTTGTATCCCAGTCTCAAAATGCTCCTGGATTAGTTGGCTTGTTGGAAACTATGCGTGTTCAAATGGAGATATCCGAGGCAATGGATATTAGAACAAGACAAGGGTTGCTAAATGCTCTTGTGGGAAAGGCGGGGAAAAGGATGGATACTCTATTGGTTCCTTTGGAGTTGCTTTGCTGTATTTCACGATCAGAATTTTCTGATAAGAAGGCTTTTATACGTTGGCAAAAGAGGCAGTTAAAAGTTTTAGAGGAAGGGCTTGTTAATCACCCTGCCGTTGGATTTGGTGAATCTGGTCGCAAGACAAATGAGTTGAGAATTCTGTTGGCCAAGATTGAAGAAGCTGAGTTTCTCCAATCTTCAACTGGTGAACTTCAAAGAACAGAATGCTTGAGATCCCTAAGGGAGATTGCCATTCCACTTGCTGAGAGGCCAGCTCGGGGTGACTTAACTGGTGAAATATGCCACTGGGCAGATGGTTACCACTTAAATGTCAGACTCTATGAGAAATTACTTTTAAGTGTATTTGACATGCTAGATGAAGGAAGGCTGACAGAGGAAGTGGAGGAAATTCTTGAACTTTTGAAGTCGACTTGGAGAGTTTTGGGAGTCACGGAGACAATCCATTACACTTGCTATGCATGGGTTTTATTTCGTCAGTATGTTATCACAAGGGAGCACGGGGTTTTGCTGCATGCACTTGAGCAATTAAATAAAATACCACTGATGGAGCAACGGGGTCAACAAGAGAGGTTGCACTTGAAAAGCTTGCGTTCCAAGTTTGAAAGTGAACGAGATATGTCTTTCTTACAGTCTTTCTTAATACCAATTCAGAGATGGACTGACAAGCAGCTTGGAGATTACCATATGCACTTCAATGAGGGTTCAGCAACGATGGAAAAGATTGTAGCAGTTGCAATGATTACGAGGAGGCTTCTACTGGAAGAACCAGAAACTACCACACATTCTTTGCCAATTAGTGATCGTGATCAGATAGAGATATATATATCATCATCAATTAAGAATGTATTTTCAAGGACAGTGCAAGTTGTTGAAAGAGTAGACATGTCAAATGAACATCCCTTGGCATTGCTTGCAGAAGAACTCAAGAAGCTCCTAAAAAAGGATTCAGTAACTTTCTTGCCTGTTTTATCTCAGAGGCATCCTCAAGCAGCTGTTGTATCTGCATCATTAGTTCACAAACTTTATGGCCACAGACTGAAACCCTTTCTGGATGGTGCTGAACATTTAAGTGAGGATGTCATTTCTGTATTCCCTGCAGCTGAAAGTCTAGAACAGTTCATAATGGCACTTATTACATCTGCATGCCATGAAGAAAATGCTGAGATCTTGTTGAAGAAATTAAATCTATACCAGATTGAGACAAAATCTGGAACTTTGGTGTTACGTTGGGTCAATTCACAGCTTGGAAGAATTTTAGGTTGGGTAGAGCGGGTTATTCAACAGGAGCATTGGGACCCGATATCTCCTCAACAACGACATGCTGGTTCTATTGTGGAAGTATACAGGATTGTAGAGGAGACGGTTGATCAATTTTTTGGTCTTAAAGTTCCAATGAGGTTTACAGAATTGAATAGCTTGTTTCGTGGCATTGACAATGCTCTTCAAGTGTATGCAAATAATGCTGTTAATGACTTGGCCAGCAAGGAGGATTTAATACCACCTGTGCCTATTCTCACGCGGTACAAAAAGGAAGCTGGAATAAAGGCTTTTGTAAAGAAGGAACTATTTGATGCTCGTGTGCCCGAGCCTGATGAGTCAAGGCCCATCCAAATTAGTGTCCTTGCAACTCCAATACTTTGTGTTCAATTAAATACATTATACTATGCAATTAATCATTTGAATAAGTTGGAAGATAACGTCTGGGAGCGATGGACAAGTAAAAGGTCCCAGGAAAAACTAATAAAGAAATCCTTGGATGAGAAGTCTAAAAGTTTTTCTCAAAAGGATACATTTGAGGGAAGTAGAAAAGTTATAAATGCTGCTATGGACCGCATTTGTGAGTACACAGGAACTAAAATCATCTTCTGTGATCTGAGAGTTCCATTTATGGACAACTTATATAAACCCAGTGTCTCAGGTGCTAGATTGGATGCACTTATTGAACCACTTGATATGGAACTTAGCCAACTTTGTGATATTGTTGTGGAGCCTCTCAGGGATCGCATAGTGACCAGTCTTCTTCAGGCATCATTGGATGGCTTACTCCGTGTTATCTTAGATGGGGGACCATTAAGAGTTTTCTTTCCTGGTGATGCAAAATTGTTAGAGGAAGATCTGGAGATCTTAAAGGAATTCTTTATATCCGGAGGTGACGGCCTTCCTCGGGGTGTTGTCGAGAATCAGGTTGCACGTGTTCGGCATGTGATCAAGTTGCATGGCTATGAGACCCGAGAGTTGATTGAAGACTTGAAATCTGCTAGTGGCATAGAAATGCATGGTGGCAAAAGCAAACTAGGAACTGATTCCAAAACACTATTAAGAATTTTATGCCACAGGAGTGACTCAGAAGCGTCTCAGTTTCTGAAGAAACAATACAAAATACCCAGTTCTTCTGCTTAG 3315 0.4109 MEEENAIELLQRYRRDRRVLLDFILSGSLIKKVVMPPGAVTLDDVDLDQVSVDYVLNCAKKSTMLELSEAIRDYHDHTGLPQMSDTGSVGEFFLVTDPESSGSPPRRPPPTVPISVVPPVSVSTPPPVFPQSPIVSNVSRSESFDSTQERELTVDDIDDFEDDDDVAVVEGFRAKRTLNDASDLAVKLPSFSTGISDDDLRETAYEILLACAGATGGLIVPSKEKKKEKKSSLIRKLGRSKSGSVVSQSQNAPGLVGLLETMRVQMEISEAMDIRTRQGLLNALVGKAGKRMDTLLVPLELLCCISRSEFSDKKAFIRWQKRQLKVLEEGLVNHPAVGFGESGRKTNELRILLAKIEEAEFLQSSTGELQRTECLRSLREIAIPLAERPARGDLTGEICHWADGYHLNVRLYEKLLLSVFDMLDEGRLTEEVEEILELLKSTWRVLGVTETIHYTCYAWVLFRQYVITREHGVLLHALEQLNKIPLMEQRGQQERLHLKSLRSKFESERDMSFLQSFLIPIQRWTDKQLGDYHMHFNEGSATMEKIVAVAMITRRLLLEEPETTTHSLPISDRDQIEIYISSSIKNVFSRTVQVVERVDMSNEHPLALLAEELKKLLKKDSVTFLPVLSQRHPQAAVVSASLVHKLYGHRLKPFLDGAEHLSEDVISVFPAAESLEQFIMALITSACHEENAEILLKKLNLYQIETKSGTLVLRWVNSQLGRILGWVERVIQQEHWDPISPQQRHAGSIVEVYRIVEETVDQFFGLKVPMRFTELNSLFRGIDNALQVYANNAVNDLASKEDLIPPVPILTRYKKEAGIKAFVKKELFDARVPEPDESRPIQISVLATPILCVQLNTLYYAINHLNKLEDNVWERWTSKRSQEKLIKKSLDEKSKSFSQKDTFEGSRKVINAAMDRICEYTGTKIIFCDLRVPFMDNLYKPSVSGARLDALIEPLDMELSQLCDIVVEPLRDRIVTSLLQASLDGLLRVILDGGPLRVFFPGDAKLLEEDLEILKEFFISGGDGLPRGVVENQVARVRHVIKLHGYETRELIEDLKSASGIEMHGGKSKLGTDSKTLLRILCHRSDSEASQFLKKQYKIPSSSA 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01811 1104 PANTHER PROTEIN UNC-13 HOMOLOG 48 1103 - -
Cca04g01811 1104 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 945 1055 IPR014772 -
Cca04g01811 1104 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 666 807 IPR014770 -
Cca04g01811 1104 PANTHER PROTEIN UNC-13 HOMOLOG 48 1103 IPR008528 -
Cca04g01811 1104 Gene3D - 708 900 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01811 Cca-Chr4 33609774 33636254 Dispersed/Transposed