Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01797 ATGGAGTGGTACTATGGATGTGAAAATAGTGGCTTTCTTGTTCCCAATGAGCAAGAAAATTTGGTGGAAAGGCATCCTTCACCAGAAAGATGGTCAGAATGGGGAATAAGTACACCACCCCAAGAGTGTTTGATGATGGACACAAATGAAACAGAGGAAGAATTCAATTTCATTGATGAAAGTTTCAACAATGAAATTGAGTTTGACCATTCTAAATATGATAAAGACCAGTCTAGCAGTTCAAGTGTGTGTGGAGGATTGACTGATCAATCTTTTCAGCAAACAGCACTTTCATGTGATCATCATCATCAGCCTAAGTATCAGCTTCAAGACCTATCAACTTTCGAATGCACCGATGACATTTTCTTGGATTCTGTACTTGAAGATTTTCCTTGTGTTGAAAGCCTACACAAATCTTTCTTTTATCCTGAAAACCAGTGCAGCAGCAACACAACTGGTGGAGTACAGAAAGATTTTGCAGCTTCAGATTTGGTTCCTTGCAACTTGGACTCTAAGGATTGCCTAGATATAGAGGGGCATGCAGTCAAAGTCTTGGACCCTTTTGAGCAGTCTAATGGAGATGACACCATGCTTGAGCAGTTCTCTCTTGAGGAATTTACACTGCAAGATTTTGAGATGATAATTGCACAGTTCACTGAGAAGACTCGTATTGGTTTTCGAGATGCCATGTACCGTCTTGCTAGAAATACAAAACAACATGTAGTTGAGGATCTGGATGGAGCTCTTAACAATGAAACCATGAGGTCTGAGGTCAAGAAACCAATGGAATCAGAGACCAACAGAGTTGACAGAGCAGTTGCAAGTCTCATGTTCAACAAGATGGAACTTAACATACTAGATCTTCCTCTTACAACTCTAGTAAACTTGAAGCAAGAAGTAACCGGAAGTAAATGTCTTGAAGGAAAAAGATCAAAAGCCTTTGATGTGGAACAAGAATCTCTCTATACACCCGGAAAAGTTACCCACCAATGCTGA 996 0.4006 MEWYYGCENSGFLVPNEQENLVERHPSPERWSEWGISTPPQECLMMDTNETEEEFNFIDESFNNEIEFDHSKYDKDQSSSSSVCGGLTDQSFQQTALSCDHHHQPKYQLQDLSTFECTDDIFLDSVLEDFPCVESLHKSFFYPENQCSSNTTGGVQKDFAASDLVPCNLDSKDCLDIEGHAVKVLDPFEQSNGDDTMLEQFSLEEFTLQDFEMIIAQFTEKTRIGFRDAMYRLARNTKQHVVEDLDGALNNETMRSEVKKPMESETNRVDRAVASLMFNKMELNILDLPLTTLVNLKQEVTGSKCLEGKRSKAFDVEQESLYTPGKVTHQC 331
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01797 331 PANTHER PROTEIN LNK1 157 304 IPR039928 GO:0006355|GO:0007623
Cca04g01797 331 PANTHER PROTEIN LNK1 1 158 IPR039928 GO:0006355|GO:0007623
Cca04g01797 331 PANTHER PROTEIN LNK4 157 304 - -
Cca04g01797 331 PANTHER PROTEIN LNK4 1 158 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca04g01797 Cca-Chr4 32890631 32894930 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01797 04 32890631 32894930 Cca04g01797 04 32890631 32894930 ECH
Cca10g01822 10 34192759 34196526 Cca04g01797 04 32890631 32894930 PCT