Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01795 ATGGCTACCCAGACAATAGCTGAAACTGCCCAGAAAATTGTGACCCCTGAAACTCTCCGCTATGCAGCCAAACAATCTGAGCGTTGTCTTGTTGTCCCTGTTCGTCTTCGCCGTGCCATTAAAAAATATCTTCAAGAGCAGGAGGAGCCATATATGAAGAGGAAAGTCTTGAGATTGTCTCAATCCTTCAATGAAATCAAGGATGTCAATCTACAGCTGGCAACCACCACAGCGAAGAAGATAGTTGAAGACCCTTTAAAATCTTTTGAGCAATCAAAACGTTGGAAGATTACAAGCTCTTATGGAGACATTGGTCTCACATATAGAGATGAAGAGACCATTGCTTATGTGGCTTCTCGAATGCCTGCCGTTTACTCTGCTTGTTACAGAGTACTTAAGGAGGTTCGCAGAAGGCTTCCCGGTTTCTCCCCATCTAGGGTATTAGATTTTGGTGCTGGGACAGGTTCAGCTTTCTGGGCACTGCAAGAAGTTTGGCCAAAATCTTTACAGAAAGTTAATTTAATAGAACCATCACAGTCAATGCAGCGTGCAGGTCGGAGCCTTATACAAGGTCTCAAGAATTTGCCACTTATTCATAGCTATGATAGCATTCAAGCACTTTCTAAAAGTATTGGTAAATCAGACAGAGGGCATGACCTTGTAATTGCTTCCTATGTTCTTGGAGAGATTCCATCAATAAAGGATCGAATTACCATAGTTCGCCAGCTTTGGGATCTAACTCAGGATGTTTTGGTTTTGGTTGAACCAGGGACACCTCATGGATCTAATATTATAGCTCAGATGAGATCTCACATATTATGGCTGGAAGAAAGAAAATACCGAAAATCTTCTCGTAAGAACAATGAAGTTTGTAAAGATTTGATCACTCAGAAGGCTGGTGCATTTGTAGTTGCGCCATGTCCTCATGATGGGACTTGTCCACTGGTAAAATCTGGAAAATATTGTCATTTTGTTCAGCGTTTGGAAAGGACTTCATCACAACGTGCCTACAAGCGTTCAAAGGGTGTTCCTTTACGTGGCTTTGAAGATGAGAAATTTTCCTATGTTGTTTTCAGGCGAGGACCAAGGCCAAGGGAACCTTGGCCCCTTGATGGTACGGAATTTGAGACTCTGAAGGAGCAGCATGCAAAAAGAAATCCAGAGGATCTTGAAATTGACTACGAGGACTGGTTGAAGTTGCAACAAGCTGATGATACCCCTCATGAAGAAGCTGATGCAGTAACTGATGAATCTGTTGATCCGGAAAATAGTGTCATTCCTCAAGAAGCAGTAAGCGTGGTAACTTACGATTCCGATGAGGTGGAAACTGACAGCGGTGCTGATGATAATGACGAGGAGGAGGAAAAGGAAGAAGAAAGAGAGAGTGCTGATCTTGGAGGTGGCTGGGGCAGGATTGTCTTCATGCCTGTGAGAAGGGGTAGACAAGTGACAATGAATGTGTGTAGGTCCACCAAAAGGGATGCCTCAGAGGGTTCATATGACCGTATTGTGGTAACACGGAGCAAGAATCCTACATTGCATCATCAGGCCAAAAGATCTATTTGGGGTGACCTGTGGCCGTTTTAA 1587 0.4354 MATQTIAETAQKIVTPETLRYAAKQSERCLVVPVRLRRAIKKYLQEQEEPYMKRKVLRLSQSFNEIKDVNLQLATTTAKKIVEDPLKSFEQSKRWKITSSYGDIGLTYRDEETIAYVASRMPAVYSACYRVLKEVRRRLPGFSPSRVLDFGAGTGSAFWALQEVWPKSLQKVNLIEPSQSMQRAGRSLIQGLKNLPLIHSYDSIQALSKSIGKSDRGHDLVIASYVLGEIPSIKDRITIVRQLWDLTQDVLVLVEPGTPHGSNIIAQMRSHILWLEERKYRKSSRKNNEVCKDLITQKAGAFVVAPCPHDGTCPLVKSGKYCHFVQRLERTSSQRAYKRSKGVPLRGFEDEKFSYVVFRRGPRPREPWPLDGTEFETLKEQHAKRNPEDLEIDYEDWLKLQQADDTPHEEADAVTDESVDPENSVIPQEAVSVVTYDSDEVETDSGADDNDEEEEKEEERESADLGGGWGRIVFMPVRRGRQVTMNVCRSTKRDASEGSYDRIVVTRSKNPTLHHQAKRSIWGDLWPF 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01795 528 PANTHER 37S RIBOSOMAL PROTEIN S22 18 528 - -
Cca04g01795 528 MobiDBLite consensus disorder prediction 403 467 - -
Cca04g01795 528 Pfam Mitochondrial small ribosomal subunit Rsm22 284 367 IPR015324 GO:0006412|GO:0008168
Cca04g01795 528 Pfam Mitochondrial small ribosomal subunit Rsm22 111 279 IPR015324 GO:0006412|GO:0008168
Cca04g01795 528 Pfam Mitochondrial small ribosomal subunit Rsm22 463 527 IPR015324 GO:0006412|GO:0008168
Cca04g01795 528 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 269 IPR029063 -
Cca04g01795 528 MobiDBLite consensus disorder prediction 441 460 - -
Cca04g01795 528 Gene3D Vaccinia Virus protein VP39 97 292 IPR029063 -