Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01778 ATGGTCCAAGAGAAGAAGCTCGTGGAAGAAGTGTCCGGTTGGTTGAGACTCTACGATGATGGTTCAGTGGACCGGACATGGACCGGTCCATCAGAAGTCAAATTCATGGTTGAATCAGTTCCTCCCCATGAAGAATTTATCAATGGAGTTGTCACTCGTGATGTAATCATGAGTGACAAGCTCCGTGTCCGGCTTTACCTACCAGAAATAATCTCCAATGAGGAGAAACTCCCTATTTTCCTACACTTTCACGGTGGTGGGTTTTGCATAAGTGAACCGGATTGGTTTATGTATTACCAATTTTACACCCGGTTGGCTCAATTGGCTCGAGTCATTGTTGTCTCCCCCTTCCTTCGTCGTGCCCCCGAAAATCGTCTCCCAGCTGCCATTGATGATGGCTTCTCTGCACTCATCTGGCTACAATCTGTAGTTAAAAGAAATGCAGAGGAGCCATGGCTTGAAAAGTACGGTGATTTTAACCGTGTTTTTCTAATTGGAGATAGCTCTGGTGCAAATATTGTGCATGAGGTGGCTACTCGAGCTGGAAGGACTCGGTTAGACCCGCTTCGTCTCATCGGAGGAATCCCAATTCATCCGGGATTCTCTCGGCCAAAACGGAGCAGGTCAGAGCTAGAGAAGCCAGAATCTCCATTTTTGACTTTGGACATGGTGGACAAGTTCATGAACTTGGCATTGCCATTGGGTTCTAACAAAGACCACCCAATTTCATGCCCCATGGGCGACAGTGCTCCGCCACTTAGTGGGCTGAAACTACCGCCATTTCTACTGTGTTTGGCGGAGATGGACTTGATCTTTGACACAGAGATGGAGTACTATGAAGCGATGCGGAAGGCCAACAAGGAAGTGGAGTTGTTTGTTAGCAAAGGAGTGACTCATAGCTTTTATCTCAACAAAATTGCCGTGGATATGGACCCAAACACTGGTGCTCAAAGGGATGCTCTTATTGCCAGGATCAAAGAGTTCATTGAGCAGCACTAA 999 0.4705 MVQEKKLVEEVSGWLRLYDDGSVDRTWTGPSEVKFMVESVPPHEEFINGVVTRDVIMSDKLRVRLYLPEIISNEEKLPIFLHFHGGGFCISEPDWFMYYQFYTRLAQLARVIVVSPFLRRAPENRLPAAIDDGFSALIWLQSVVKRNAEEPWLEKYGDFNRVFLIGDSSGANIVHEVATRAGRTRLDPLRLIGGIPIHPGFSRPKRSRSELEKPESPFLTLDMVDKFMNLALPLGSNKDHPISCPMGDSAPPLSGLKLPPFLLCLAEMDLIFDTEMEYYEAMRKANKEVELFVSKGVTHSFYLNKIAVDMDPNTGAQRDALIARIKEFIEQH 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01778 332 PANTHER CELL DEATH ASSOCIATED PROTEIN 3 329 - -
Cca04g01778 332 Pfam alpha/beta hydrolase fold 81 302 IPR013094 GO:0016787
Cca04g01778 332 Gene3D alpha/beta hydrolase 5 331 IPR029058 -
Cca04g01778 332 SUPERFAMILY alpha/beta-Hydrolases 6 332 IPR029058 -
Cca04g01778 332 PANTHER ARYLACETAMIDE DEACETYLASE 3 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01778 Cca-Chr4 32097783 32098862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01778 7 330 Carbohydrate Esterase AT5G16080 35.821 1.42e-58 190
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01778 04 32097783 32098862 Cca04g01778 04 32097783 32098862 ECH
Cca10g01848 10 34701750 34703019 Cca04g01778 04 32097783 32098862 PCT