Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01774 ATGTCAATTGATTTTTGGAAGACATTAAATGAAATTCACCCAAGTTTGGGTGATTCATCAAAAGGTACGCTACAGAGCATCAGCAATGATACTCTTGCCAGATTAACTGGGGTCATTCATTCATTAAAGCGGGAGAAGCAACAAAGGCTACAAAAGATACAAGAGCTTGCCAAATTTATGGTAGAGCTATGGGATCTTATGGAGACACCAATTGAAGAGCAAAAGGCCTTTAGCCATGTTATTAGATTAATTTCAGCATCAGTTGATGAAGTGTCAACACAAGGATGCCTTTCTGCATATGTCATTGAGAAGGTCGAGGTTGAAGTTCAGCGCTTAAATGTTGTGAAAGCCAGTAAGATGAAGGATTTAGTGTTTAAGAGGCAGAATGAGCTTGAAGAAATTTACAGAGGAGTTCACATGGATGTAGATAGTGAAGCTGCTAGACAGATTTTGACTAGCCTCATTGAATCTGGTAATATTGATCTGTCTAATTTGCTTCAAAGCATGGATGATCAAATCAGAAAAGCCAAAGAGCAAGCTCTAAGCAGAAGAGATATCTTAGATAGGGTAGAGAAATGGAAATTTGCTGCTGAGGAGGAAAAGTGGTTAGATGAATATGAAAGGGATGAAAATCGATATAGTGCAGTAAGAGGAGCACACAAAAATTTGAAGCGCGCTGAGAAAGCACGGATTCTTGTCAGCAAGATACCATCTATGGTGGAGAATCTGACTGCAAAAATAAAAGCCTGGGAAATGGAAAAAGGAATACCCTTCTTATATGAAAAGGTTCCTTTGTTACATAACTTGGATGAATATATTTTGCAACGGCAACTGAGAGAAGAAGAGAAGCGCAAATCTCGGGAGCAGAAGCGACTACAGGAACAACATGCTGTAGAGCAAGAGGCACTTTATGGTTCAAGGTCTGCAACCAAAAAGCCTCTAGGTCAGAGCACTAATGCTAACACCAATGTTGGGACACCCATCGGCCGCCGAATGCTTACTCCTTCCGGCCACCATCGAACCTCAGGAGGAAAGGATCGTAGAGAGAGTGGAAGAGTGAATAACATAATTCCAGTGAACTATGTTGCTCTTCCAAAAGATGATTCTGTTCCTAGGGGCAATTAA 1125 0.408 MSIDFWKTLNEIHPSLGDSSKGTLQSISNDTLARLTGVIHSLKREKQQRLQKIQELAKFMVELWDLMETPIEEQKAFSHVIRLISASVDEVSTQGCLSAYVIEKVEVEVQRLNVVKASKMKDLVFKRQNELEEIYRGVHMDVDSEAARQILTSLIESGNIDLSNLLQSMDDQIRKAKEQALSRRDILDRVEKWKFAAEEEKWLDEYERDENRYSAVRGAHKNLKRAEKARILVSKIPSMVENLTAKIKAWEMEKGIPFLYEKVPLLHNLDEYILQRQLREEEKRKSREQKRLQEQHAVEQEALYGSRSATKKPLGQSTNANTNVGTPIGRRMLTPSGHHRTSGGKDRRESGRVNNIIPVNYVALPKDDSVPRGN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01774 374 Coils Coil 275 298 - -
Cca04g01774 374 MobiDBLite consensus disorder prediction 310 329 - -
Cca04g01774 374 Gene3D - 173 306 - -
Cca04g01774 374 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 1 369 IPR007145 GO:0000226|GO:0008017
Cca04g01774 374 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 5 1 369 - -
Cca04g01774 374 Coils Coil 159 179 - -
Cca04g01774 374 MobiDBLite consensus disorder prediction 284 374 - -
Cca04g01774 374 Pfam Microtubule associated protein (MAP65/ASE1 family) 23 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01774 Cca-Chr4 31907833 31938590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01774 1 319 EF-hand Containing Proteins AT5G62250 44.099 2.20e-70 228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01774 04 31907833 31938590 Cca04g01774 04 31907833 31938590 ECH