Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01770 ATGAAATCTGATGTTTTCAGTTTTGGAGTTCTTGTTCTAGAAATCATTTGTGGGAAAAAGAACAGTGGATTCTATCTATCAGAATGTGGTCAAAGTCTTACTTTATATGCTTGGAAAATATGGTGTGCAGGAAAATGTTTGGAACTAATGGATCCGGTGCTGGAGGAATCTTACATAGAGAGTGAAGTTGTGAAATCCATACACATTGGTTTGTTGTGTGTTCAGGAAGATGCAGCAGATAGACCAACCATGTCTACTGTTGCTGTAATGCTAGCAAGTGACACAATGGCCCTTCCAAAACCTAACCAACCAGCATTTTCAGTTGGAAGAATGACCTCAGAGGATGCATCTACATCAAAAAGTTCCAAGAATCTTTCCATTAATGATGTAACTGTCTCTAACATTTTACCAAGGTAA 417 0.3813 MKSDVFSFGVLVLEIICGKKNSGFYLSECGQSLTLYAWKIWCAGKCLELMDPVLEESYIESEVVKSIHIGLLCVQEDAADRPTMSTVAVMLASDTMALPKPNQPAFSVGRMTSEDASTSKSSKNLSINDVTVSNILPR 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01770 138 MobiDBLite consensus disorder prediction 100 122 - -
Cca04g01770 138 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 1 136 - -
Cca04g01770 138 Pfam Domain of unknown function (DUF3403) 93 138 IPR021820 GO:0004674
Cca04g01770 138 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 136 - -
Cca04g01770 138 MobiDBLite consensus disorder prediction 106 122 - -
Cca04g01770 138 SUPERFAMILY Protein kinase-like (PK-like) 2 124 IPR011009 -
Cca04g01770 138 Gene3D Transferase(Phosphotransferase) domain 1 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01770 Cca-Chr4 31775133 31775635 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01770 1 138 Receptor kinase-like Gene Family AT4G23150 52.083 1.14e-43 149