Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01759 ATGTCTGAAGAACCACTGAATATTGTGGTGATCCACTATGTATCAAGAGACTTTAATACAAGTGCAATTAAAATGGCCATGCAGGGATTTTCACTTGAGCATGGAGACAAGCTTACATTTGTTGTAATTCTTCGGCCTGTTAGTAGTCCCACTAGGATTCCCTTCATTGCACCTGCCAGATTGCGTGGATTATTCGACACTGATCAGAAAGATGTTGAGGAAGAGGTTGCCAAGAAGAAAGAAGAGCTTCTTAATAATGCAAGCATCAGGGAAATCTCTGAGCAGTGTGAAGCAGACAAGATCCAATTCCGGATAGAAGTGATTCATGGCAATTTACCAGAGGTTGCTGTAAATGCCGCCATACGTTTGGATCCAACATCAGTGGTACTTGATAGGTCAATGAAGAAATATAAGAAGGATTTCAAGCGGAGTCTCTCTTGTGCTTTGCTAATAATGAAACGTGACAACTCTATGCAACACTTGAGAGGACCAAGGGAAACACATCTGTGTGCTAGAAACAACGGCAATGCAAGTTGTGGAAGATGTTCTAATTCTAAATCTCCACCAACCATGTTCCAAGTGGCAAATTCAATTTTCTGCTCCAATTCCAGCTCTTCAATTCCTACTCTTGAAAAGTTTGCGATCCCCCAACTTCCTTCTCAAATGAAACAAATCGCTGAAGATAGAGAACAAGACATGGCAAGAGGGTATTGCCTATTGCCCAATCCAGATAATCAAAAGACTAATCATGCTGAATTGTATCACATAGAGACACCGATCAAACATAGCAGTAACCATGAAACATATCGGACAGTTGAAAAATTTAAAAATTCTGTTTGCTCAGTATGCAAGAACAGAAGACCGGAAATTGAAGTGATGAAAGAATTCACATACGCGGAGCTACATGAAGCCACACAGGGTTTTTCCCCAAATAACTATTTGTCAGAAGGTGGATTTGGTTCTGTCTACAAAGGGAAGCTTCAAGGAGGACTCAAGATTGCTGTTAAGCAACATAAGTGTGCAAGCCTCCAAGGAGAGAAGGAATTCAAATCTGAAGTTAATGCACTCAGCAAAGCAATACATGAGAATGTGGTCATGCTGCGTGGATCCTGTTCAGAAGGAAATCACAGGATTCTTGTGTATGAATTTGTTTGCAATGGATCACTTGACCAACATTTATCACAACACTCTCGTAAACCGCTTAGTTGGGCAGAAAGGATCAAAGTAGCTATTGGAACTGCAAAAGGCTTATTGTACTTGCATCAGAACAATATAATACACAGAGATATGAGACCTAGTAACATCCTTGTCACCCATGATTATGAAGCAATGCTTGGAGATTTTGGTCTGGCCAGGACCGAACAAATGGACTCTTTATACTCCACAGATGTTGTTGGAACTATAGGTTATTTGGCACCAGAATATGCAGAATCTGGGAAAATGTCAACCAAGACAGATGTGTATTCTTTTGGTGTGGTTCTTCTTCAGCTAATAACTGGAATGAGGACCGCAGACAAACGGCTTGGCGAAAAAAGTCTTGTGGGATGGGCTAGGCCACTATTGAAAGAAAGGAACTATCCAGATCTAATTGATGAAAGGATGATGGATAATCATGATTGCCATCAGCTTTTTTGGATGATTCGTCTAGCAGAAAAATGTCTCAGCAGAGATCCTCAGAAGCGATTATCAATGGATACAGTGGTCATTGCCTTAAATCATATACTAGAAGGCAATACATGCAGTGTTGTACTGAGAGACTGTTCTCCAGCACGGTCAGATTCATCCTATGACATGTCAGACATACTTATATCAGATACCTCTCACTCTCAGGAATTAGAAGGTGAAGAAGATGGAAGCATGTATGCAGCATATGCTCCAATTTGTTTAAGACCCCCACCATCCCCTCCATTAGGAAGCACTTCATCATCAAGTACAACATCAAGCATGTTCACAGGGCTAAGTGAATCTCCTTCAGATGATTTATCCAATGATGACAATAAGGGTAAAAGGCCAAATGATCCAGGTGCCATATTTTGA 2037 0.408 MSEEPLNIVVIHYVSRDFNTSAIKMAMQGFSLEHGDKLTFVVILRPVSSPTRIPFIAPARLRGLFDTDQKDVEEEVAKKKEELLNNASIREISEQCEADKIQFRIEVIHGNLPEVAVNAAIRLDPTSVVLDRSMKKYKKDFKRSLSCALLIMKRDNSMQHLRGPRETHLCARNNGNASCGRCSNSKSPPTMFQVANSIFCSNSSSSIPTLEKFAIPQLPSQMKQIAEDREQDMARGYCLLPNPDNQKTNHAELYHIETPIKHSSNHETYRTVEKFKNSVCSVCKNRRPEIEVMKEFTYAELHEATQGFSPNNYLSEGGFGSVYKGKLQGGLKIAVKQHKCASLQGEKEFKSEVNALSKAIHENVVMLRGSCSEGNHRILVYEFVCNGSLDQHLSQHSRKPLSWAERIKVAIGTAKGLLYLHQNNIIHRDMRPSNILVTHDYEAMLGDFGLARTEQMDSLYSTDVVGTIGYLAPEYAESGKMSTKTDVYSFGVVLLQLITGMRTADKRLGEKSLVGWARPLLKERNYPDLIDERMMDNHDCHQLFWMIRLAEKCLSRDPQKRLSMDTVVIALNHILEGNTCSVVLRDCSPARSDSSYDMSDILISDTSHSQELEGEEDGSMYAAYAPICLRPPPSPPLGSTSSSSTTSSMFTGLSESPSDDLSNDDNKGKRPNDPGAIF 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01759 678 MobiDBLite consensus disorder prediction 632 678 - -
Cca04g01759 678 Pfam Protein tyrosine and serine/threonine kinase 312 568 IPR001245 GO:0004672|GO:0006468
Cca04g01759 678 SUPERFAMILY Protein kinase-like (PK-like) 292 590 IPR011009 -
Cca04g01759 678 ProSitePatterns Tyrosine protein kinases specific active-site signature. 425 437 IPR008266 GO:0004672|GO:0006468
Cca04g01759 678 PANTHER TYROSINE KINASE FAMILY PROTEIN 7 645 - -
Cca04g01759 678 PANTHER OS01G0253100 PROTEIN 7 645 IPR045271 GO:0004714|GO:0006468
Cca04g01759 678 MobiDBLite consensus disorder prediction 639 659 - -
Cca04g01759 678 Gene3D Phosphorylase Kinase; domain 1 265 383 - -
Cca04g01759 678 Gene3D Transferase(Phosphotransferase) domain 1 384 586 - -
Cca04g01759 678 ProSiteProfiles Protein kinase domain profile. 308 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01759 Cca-Chr4 31419598 31425403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01759 288 572 Trihelix Transcription Factor Family AT1G70460 47.157 6.15e-80 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Cca04g01759 PK_Tyr_Ser-Thr 6.7e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01875 10 35584081 35608104 Cca04g01759 04 31419598 31425403 PCT