Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01749 AAACCCGTTGTGGATGCTGTTCATGCCAAAGGTGGTATATTCTTCTGCCAAATTTTTCATGCTGGAAGGCCATTGACACCGAAAAGTTTTGAGGCAAATGGGCAGGCTCCAATATCATTGACTAACAAGCCATTGACACCGAAAAGTAATGGCATCGAACCAAGGCCATTAAGGACAGATGAAATTCCTCATATTGTCAACGAGTTCAGACTTGCTGCAAGGAATGCTATGGAAGCAGGGTTTGATGGAGTTGAGATTCATGCGGCACATGGTTTTCTTATTGACCAGTTTTTGAAAGATCAAGTTAACGACAAAAAAGACGAACATGGTGGATCCTTAGAGAACCGTTGTCGCTTTGCGTTAGAAGTTGTTAAAGCTGTTGTTGAAGAAATTGGGGCAAATAGAGTAGGAATGAGATTGTCACCCTTTTCGGACTACAATGAATGCAGTGACTCAAACCCTCAAGAATTGGGTCTCCACATGGCCAAATCTCTTAGCAAACATAGTTTGCTTTATTGCCACATGGTTAAGCCACGGTGGGACGTTTCTGGAGTGAATAGGGAAAGTCCTTACACTCTAGCACCAATGAAGAAGGCCTTTAATGGAACTTTCATTGTTGCTGGAGGGTATGATAGAGAAGAAGGTAATAGGGCTGTGGTTGAAGGCAAAACAAATCTTGTTGCTTATAGTCGTTTGTTTTTGGCTAATCCAAACTTGCCTAAGAGATTTGAAATTGATGCACCACTCAACAAGAATAGGGACACCTTCTACACTCATGATCCAGTTGTTGGTTATTATACTGACTAG 807 0.4176 KPVVDAVHAKGGIFFCQIFHAGRPLTPKSFEANGQAPISLTNKPLTPKSNGIEPRPLRTDEIPHIVNEFRLAARNAMEAGFDGVEIHAAHGFLIDQFLKDQVNDKKDEHGGSLENRCRFALEVVKAVVEEIGANRVGMRLSPFSDYNECSDSNPQELGLHMAKSLSKHSLLYCHMVKPRWDVSGVNRESPYTLAPMKKAFNGTFIVAGGYDREEGNRAVVEGKTNLVAYSRLFLANPNLPKRFEIDAPLNKNRDTFYTHDPVVGYYTD 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01749 268 Gene3D Aldolase class I 1 268 IPR013785 -
Cca04g01749 268 MobiDBLite consensus disorder prediction 32 48 - -
Cca04g01749 268 PANTHER 12-OXOPHYTODIENOATE REDUCTASE 1-RELATED 1 265 - -
Cca04g01749 268 SUPERFAMILY FMN-linked oxidoreductases 1 266 - -
Cca04g01749 268 PANTHER NADH OXIDOREDUCTASE-RELATED 1 265 IPR045247 GO:0010181|GO:0016491
Cca04g01749 268 MobiDBLite consensus disorder prediction 32 57 - -
Cca04g01749 268 Pfam NADH:flavin oxidoreductase / NADH oxidase family 1 248 IPR001155 GO:0010181|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01749 Cca-Chr4 30973426 30974930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01749 1 265 Acyl Lipid Metabolism Gene Families AT1G76690 64.599 5.72e-129 369