Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01738 ATGGACATCGAGCAGAAGCAATCGGAACTCATCGACCACTTCGTCAAGCGAgcctccgccgcctccgacgccgccgcactcgcctccgTCCTCGTCGAAGCCACCTCTCACCCTTCGCTCTTTGCTTTCTCTGAGATTCTCGCTCTTCCCAATCTTCTGCAGCTTGAGGCAACTGAGAATTCTGCTTACCTTGATGTGCTTCGATTGTTTGCACATGGAACATGGAGCGATTACAAGAGTAATGCTGACCGTCTTCCACAATTGATACCTGATCAGATCCTCAAGCTTAAGCAACTAACGGTTCTTACGCTGGCTGAGACATACAAGGTTCTACCCTATGACCAACTGATGCAGGAGTTAGATGTGACAAATGTCCGTGAACTTGAAGATTTTCTTATTAATGAATGCATGTATGCGGGAATAGTCCGTGGAAAGCTCGATCAGTTGCGACGATGCTTTGAGGTCCAATTTGCAGCAGGTAGGGACTTGAGGCCTGATCAACTGGGGAATATGATACAGACTCTCTCTAGCTGGTTGTCTACATCAGAAAATCTGCTTGTTTCAATTCAAGAGAAGATAAAATGGGCTGACGCTATGAGTGAAATTGACAAGAAGCACAGGAAGGATGTGGAAGAAAAGGTGGAAGAAGTAAAGAAGTCCATTTTCAAGAAGTTACACACTGTAAGCAGGCCGACATCGACTTCAGAGGCCATGAGGAGATCTGCTCTGAATCTGGTGGAGTGA 744 0.4315 MDIEQKQSELIDHFVKRASAASDAAALASVLVEATSHPSLFAFSEILALPNLLQLEATENSAYLDVLRLFAHGTWSDYKSNADRLPQLIPDQILKLKQLTVLTLAETYKVLPYDQLMQELDVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPDQLGNMIQTLSSWLSTSENLLVSIQEKIKWADAMSEIDKKHRKDVEEKVEEVKKSIFKKLHTVSRPTSTSEAMRRSALNLVE 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01738 247 Pfam PCI domain 63 155 IPR000717 -
Cca04g01738 247 ProSiteProfiles PCI domain profile. 1 160 IPR000717 -
Cca04g01738 247 SMART PINT_4 87 178 IPR000717 -
Cca04g01738 247 PANTHER COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17 4 224 IPR045237 -
Cca04g01738 247 PANTHER COP9 SIGNALOSOME COMPLEX SUBUNIT 7 4 224 - -
Cca04g01738 247 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 87 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01738 Cca-Chr4 30281949 30289616 Dispersed