Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01728 ATGCAAAATCCCTGGGTCAATCAATCAGGGTTGTATTCTGGGGATTATCCAAACCTCCTCAGTAATATGTTGCAGCAACAATTAAACCATCATAGTGGATCATTATCACCTCATTTATTGACCCAATTGCAGCAGCAACAGCATAGACTGCATCATCCCATTCAGCAATCCAGAGGCTACATGTTCCAATCCCATTTACTTAGTCCTCAGGTTTCTTCTGGATCATCCATAGTTAGCAAATATGAACATATGCTTGGTCTTGCTGATGTTGGAGAACACAGACCAAAATCAACGCATAAGGGTAAACAGAGTCATCGTTTCTCACAACATGGATCTGATGCCAGTAGCCTGAAGAATGGAAGTGGCTCATTAAAGTTTAGGTCCAAGTATATGACCAGTGATGAAATAGAGAGTATTCTTAGAATGCAGCTGGCTGTGACTCATTGTAATGATCCCTACGATGATGACTATTATCACCAAGCTTGTCTTGCTAAGAAATCTGGGGCTAAGTTGAAACATTCATTTTGCCCAATACAAATAAAGGAACTTCCTCCAAGTGCTCGTGCCAATACTGAGTCCCATGGTTTTCTTCAGGTCGATGCTTTAGGGAGGGTTTCATTCTTGGCTATTCGCCGGCCTCACGCTCTTCTTGAAGTTGATCTGTCAAATTCTTCTATTAGTGGTAGCACTGAGCGAAATATTTCAGAGAAACCCCTTGAACAGGAGCCTCTGTTTGCAGCCAGAGTCACAATTGAGGATGGTCTATGTCTTCTTCTTGATGTAGAGGATATTGATCGTTTTCAGCAATGTAATCAGCTTCAAGATGGTGGAGCTCAATTAAGACGAAGACGGAAGGTTCTTTTGGAAGGACTAGCAACATCACTCCAACTTGTTGACCCACTGGGAAAGAATGGACACAATGTTGGGCTCGGTGCTAAGGATGATGTTGTTTTCTTACGATTAGTATCTATACCCAAAGGGCGTAAACTCCTAGCTAAGTATCTTCAGTTACTTGTTCCTGGTAGTGAGCTTATGCGTCTAGTCTGCATGGCCATTTTTCGTCATTTGAGATTCTTATTTGGTGTTCTCCCCTCTGATCTGGCTGCTGCAGAGACTACAAGCGACCTTTCTAAGGTTGTTTGTCAGTGTGTCCAAGGAATGGATTTTGGTGCCCTAGGTGCTTGTCTTGCAGCAGTGGTTTGTTCCTCAGAGCAGCCTCCTCTACGTCCTCTTGGAAGCACTGTTGGAGATTGTGCCTCCCGTATTTTAGTATCTGTTCTTGAGAGGGCCGCTGAACTTCTTGCTGATCCCCATGGTGCTTGCAGCTATATAGGTAATAGGTCGTTTTGGCAGGCCTCATTTGATGAATTTTTTGGCCTTCTCACAATGTATTGCATGAATAAATACCAAAGTATCATGCCATCACTGCTCATACAAGGTAAACCAAATGTGGCTGTAATTGGATCAGATGCTGCTAAAGCAATTAGCAAGGAAATGCCTGTTGAACTCTTACGAGCAAGTCTTCCTCACACCAATGATCAGCAGAGGAAATTATTACTAGATTTTGCTCAGCGCTCTGTGCCTGTAATTGTATTTAACAGCTATACAGGGAGCAGTGGTGGTCATGTGAACTCAGAGACTGTGCTAAGTTGA 1653 0.4307 MQNPWVNQSGLYSGDYPNLLSNMLQQQLNHHSGSLSPHLLTQLQQQQHRLHHPIQQSRGYMFQSHLLSPQVSSGSSIVSKYEHMLGLADVGEHRPKSTHKGKQSHRFSQHGSDASSLKNGSGSLKFRSKYMTSDEIESILRMQLAVTHCNDPYDDDYYHQACLAKKSGAKLKHSFCPIQIKELPPSARANTESHGFLQVDALGRVSFLAIRRPHALLEVDLSNSSISGSTERNISEKPLEQEPLFAARVTIEDGLCLLLDVEDIDRFQQCNQLQDGGAQLRRRRKVLLEGLATSLQLVDPLGKNGHNVGLGAKDDVVFLRLVSIPKGRKLLAKYLQLLVPGSELMRLVCMAIFRHLRFLFGVLPSDLAAAETTSDLSKVVCQCVQGMDFGALGACLAAVVCSSEQPPLRPLGSTVGDCASRILVSVLERAAELLADPHGACSYIGNRSFWQASFDEFFGLLTMYCMNKYQSIMPSLLIQGKPNVAVIGSDAAKAISKEMPVELLRASLPHTNDQQRKLLLDFAQRSVPVIVFNSYTGSSGGHVNSETVLS 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01728 550 PANTHER PROTEIN PAT1 HOMOLOG 2 529 - -
Cca04g01728 550 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 2 529 IPR039900 GO:0000290
Cca04g01728 550 MobiDBLite consensus disorder prediction 92 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01728 Cca-Chr4 29721488 29726923 Dispersed