Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01721 TATGCAATCAAGCTTAAGCAAGGGAAACCGCTTGCTTTCGTGTACTTGTGGCTGTGGTGGAGCACTTGTGCTCATGTTAATGCAGCAAACAACAGTTTAAGGCCTGGTGATACACTGCACCACACAGAGAAACCAACACTATACTCTAAAAACGCCAAATATTATTTAATTTTTAGTAGAACTACTAGTGATGAGAACAATTACTTGGTTATATGCAATGCAAATAAGGATGCTGAAGTTTGGATGAGTGATACAACCCAACCTGTTGACCTAGATTCTGCAGTTTTATCACTTAACCACTCTGGTGTGCTGAAAATAGAATCTCAACGTGGGAAACCAATAATCCTCTATTCTCCACCTCACCCTATCAACAACACTGTGGCCACGTTGTTGGACACAGGAAACTTTGTGCTTCAACAACTTCACCCAAATGGGTCTACAATGAGTGTGTTGTGGCAGAGTTTTGATTATCCATGTGACACTTTGGTTCCTACCATGAAGTTAGGGTTTAATCACAAAACAGGCCATCATTGGTTCCTGGTTTCGTGGTTTACTAAGTCACTTGCGACTCCAGGTGCCTTTAGCCTCGAATGGGAACCAATGGCGCAAGAGTTGATCATCAAGAGACGAGGAAAAGTTTGTTGGCGAAGTGGGAAACTGAGGAACAATAGGTTTGAGCACATTTCAGAAGATGCACAACGCACGTTGAGGTACACCGTTGTGTCCAATTCCAATGAAGACTCATTCTCTTTCACAACTACGAATGAAGATGGTACACTGTGGTGGTGGCTAACGGATATGGGGGAGTTAGCTAATGATAAAGTGTATGTTGCAAGGGCTGATATGTGTTTTGGGTACAACAACTCTGATGGAGGGTGCCAAAGGTGGGAGGATATACCTAAGTGTAGGAACCGTGGTGATGTGTTTCGGATAAAGACTGGTTACGTGAGTTACCAAAATGCAACCTCGGAGCAGAATACAAGTTATGGTTACAGTGATTGCGAGGCCAGTTGCTGGAGCAATTGTACTTGTGCTGGATTCAGAAAATTTTATCGTAATGGAACTGGATGTTATTTCTTTCACTGGATTAATTCATCGGAAAATTATGCTTTAGACAGTAATGGTGAAAACTTTTACTTACTGGAGAACATATTAACTCGTGATCAGCATAAGGGTAAGTGTACAAAAAAGTGGACATGGATAGGTGCAGTAATAGCAACTGCTGTAGCCATAATTTGCTTACTCATTATGTGCCTAGCCATAAAAAAACGAAAATATATGCTTCAAGGGAAGAAAAGCAAAGGAATGGTGATGAAGATGTTACGTTTAGCAACCTGCAATCGGTCATCTGGTATGGAAGATTTTGAAATTGATTTAAAAAAGGGAAACAACTTAAAAGTGTTTAAGTATACATCAGTAATGATGGCAACACATGGATTTTCATCTGAAAATAAGTTAGGACAAGGTGGTTATTATTAG 1479 0.4043 YAIKLKQGKPLAFVYLWLWWSTCAHVNAANNSLRPGDTLHHTEKPTLYSKNAKYYLIFSRTTSDENNYLVICNANKDAEVWMSDTTQPVDLDSAVLSLNHSGVLKIESQRGKPIILYSPPHPINNTVATLLDTGNFVLQQLHPNGSTMSVLWQSFDYPCDTLVPTMKLGFNHKTGHHWFLVSWFTKSLATPGAFSLEWEPMAQELIIKRRGKVCWRSGKLRNNRFEHISEDAQRTLRYTVVSNSNEDSFSFTTTNEDGTLWWWLTDMGELANDKVYVARADMCFGYNNSDGGCQRWEDIPKCRNRGDVFRIKTGYVSYQNATSEQNTSYGYSDCEASCWSNCTCAGFRKFYRNGTGCYFFHWINSSENYALDSNGENFYLLENILTRDQHKGKCTKKWTWIGAVIATAVAIICLLIMCLAIKKRKYMLQGKKSKGMVMKMLRLATCNRSSGMEDFEIDLKKGNNLKVFKYTSVMMATHGFSSENKLGQGGYY 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01721 492 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 185 IPR036426 -
Cca04g01721 492 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 10 491 - -
Cca04g01721 492 ProSiteProfiles Bulb-type lectin domain profile. 30 151 IPR001480 -
Cca04g01721 492 Pfam D-mannose binding lectin 80 183 IPR001480 -
Cca04g01721 492 SMART blect_4 30 158 IPR001480 -
Cca04g01721 492 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 491 - -
Cca04g01721 492 Gene3D - 24 155 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01721 Cca-Chr4 29500828 29503354 Dispersed/Proximal