Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01704 ATGCTTCATCTCCGCCACCGCCGCGACTCCACGCCGGCCACCACGCGCTGGCGCAACACGTTCGAGGAGAATCTGGAGCAGTGGCCGCACCTCAACGAACTGGTCCATTGCTACACCACGGATTGGGTCAAAGATGAGAACAAGTACGGACACTACGACACCGTCGGAACGCCGTCGTTTCATAACCAGATATATGAGGGCCCCGATACTGACATTGAAACTGAAATGCGGCTTGCCGGGGCAAGGAGAACAAAGGGAGACGATGAGGATGACATTCCTAGTACTTCGGGAAGGCAGTTTACCGAAGGTGCAGATGGTGACTTGCTGCATTCGGATGTTCAGAAGCATATTGGTCAATCTCCTCTTCCTGCTTATGAGCCTGCGTTTGATTGGGAAAATGAGAGGGCGTTGATATTTGGACAAAGGATACCAGAAACTCCTCTATCACATGGAATGAAGATCTCTGTAAAAGTTCAGTCTTTACAATTTCAAGCAGGATTGGTTGAGCCCTTTTATGGTACAATTTGCTTATACAATAGGGAGAGAAGAGAAAAGTTATCGGAAGACTTTTACTTTCATGTCTTACCAACTGAAACGCAGGATGCCAAAATTCAATCTGAACCTCGTGCAGTCTTTTACCTAGATGTGCCATCTGCTTCAGTTTGTTTGTTAATCCAGTTGGAGAAGCATGCTACTGAAGAAGGCGGTGTTACTGCTTCTGTTTATTCACGTAAAGATCCAGTGCACCTGACTGAGAGAGAGAAGCAAAAACTGCAGGTGTGGTCTAAAGTCATGCCTTACAAAGAGTCCTTCGCATGGACCATGGTATCATTATTTGATAGCAGTATTGGTGCAGCTTCAGTAGGGCCTGCTTCCCCAAGCAGCCCTCTTGCTCCAAGTGTATCTGGTTCGAGTTCTCATGAAGGTGTTTTTGAGACTAGTGCAAAGATCTCTTTAGATGGAAAGATGAGTTACTCTAATGGAAATTCTGTGGTAGTTGAGGTTTCAAACTTAAATAAAGTCAAAGAAAGCTATACTGAGGAATCACTTCAGGATCCTAAACGTAAGGTGCACAAACCTGTCAAAGGTGTTTTGAGGCTGGAAATTGAAAAGCACCAGATTTCCCAAGCGGATTTGGAAAACATGTCAGAAAGTGGTAGTATTACTAATGATTCTGTTGACCCTGGGGATCGGATTGCAGATTCACTGTCTGTTTCAGGAAATGGAACAACTCAACATGGAATTTCAGATTTTAATGCCGATGATTTCCATGCTTTTGACTTCCGCACTACAACAAGAAACGAGCCTTTTTTGCAACTTTTTCACTGCCTGTATGTGTATCCGTTGACTGTAAGTTTGGGTAGGAAAAGGAATTTGTTTATACGGGTTGAACTCAGGGAGGATGATGGTGATATTCGTAGGCAGCCATTGGAGGCAATATATCCTAGAGATCCAGGTCTAGATGCATCATTTCAGAAGTGGGGTCACACCCAAGTTGCTGCTGGGGCTAGGGTTGCTTGCTACCACGATGAAATTAAACTTTCCCTTCCTGCTACGTGGACGCCAAATCACCACCTTTTATTTACTTTATTTCATGTTGATCTGCAAACAAAATTGGAAGCTCCTAAGCCAGTGGTTATTGGATATACAGCACTTCCTTTATCATCCCATGCTCAGCTGCGGTCGGAAATAAATCTTCCAATTATGAGAGAATTGGTTCCTCATTATCTCCAGGATGCAGGACGGGAGAGATTGGATTATTTGGAAGATGGGAAAAGTGTCTTCAGATTGCGTTTAAGGCTATGTTCTTCTTTATACCCTATCAATGAACGCATTAGAGATTTCTTTCTTGAATATGATCGGCACACTCTTCGAACAAGTCCGCCATGGGGTTCTGAACTTCTGGAGGCCATTAATAGTTTGAAGAATGTTGATTCCACTGCTTTACTTCAGTTTCTTCACCCAATTCTTAACATGCTACTTCATCTTATTGGCAATGGTGGAGAAACACTACAGGTTGCTGCGTTTCGGGCCATGGTTAATATTGTAACCAGGGTGCAGCAGGAGTCAGTTGATGATGCTGAAAGAAATCATTTTCTAGTTAACTATGTTGATTGTGCTTTTGATGATTTTGGTGGTCGTCAACCACCTGTATATCCTGGGCTGTCCACTGTTTGGGGAAGCTTGGCACGGAGTAAGGCCAAAGGGTATCGTGTTGGACCTGTGTATGATGATGTTTTGGCTATGGCATGGTTTTTTTTGGAGCTAATTGTTAAATCAATGGCATTGGAGAAGACTCGCCTCTTCTATCACAGCCTTCCAATAGGTGAAGATATCCCCCCAATGCAGTTGAAGGATGGTGTATTCAGATGTATAATGCAGTTGTATGATTGCCTACTTACTGAGGTGCATGAGCGCTGTAAGAAGGGTTTAAGCTTGGCGAAACGCTTGAACAGTAGTTTGGCCTTCTTTTGTTATGATCTTCTATCCATTATTGAGCCACGGCAAGTTTTTGAGTTGGTATCATTATATCTTGACAAGTTCTCTGGTGTATGTCAATCGGTTCTTCATGAATGCAAACTTACCTTTTTACAAATAATATGTGATCACGATCTATTTGTGGAAATGCCTGGAAGGGACCCTTCAGATAGGAACTACCTTTCTTCAGTATTAATACAAGAACTCTTTATTACTTGGGATCATGAAGATTTGTCTCTTCGAGCAAAGGCAGCAAGAATTTTGGTAGTGCTCTTGTGCAAACATGAGTTTGATGTGAGATACCAGAAGCCTGAAGATAAGCTGTATATAGCACAGCTATATTTCCCACTTGTTGGACAGATATTAGACGAAATGCCTGTTTTCTACAACCTCAATTCTGTTGAAAAGCGTGAAGTTTCAATTGTAATTTTGCAAATAGTTCGAAACCTTGATGATGCATCACTTGTCAATGCATGGCAACAAAGCATTGCCCGGACTAGATTGTTTTTCAAGCTAATGGAGGAATGCTTGCTTCTATTTGAGCACAAAAAACCTGCTGATGGCATGTTACTTGGATCCAGTTCTCGCAACCCAGTAGGGGAGGCACCCACTTCCCCTAAGTACTCTGACAAGCTTTCTCCTGCAATCAACAACTATCTGTCTGAGGCCTCAAGGCAGGATGTCAGGCCTCAGGGAACACCAGATAATGGGTATTTATGGCAGAGAGTAAATTCTCAGTTAAGCTCTCCTAGCCAGCCGTATTCCTTGAGAGAGGCTCTAGCTCAAGCACAGTCTTCTAGGATTGGAGCTTCTGCTCAAGCATTGCGAGAATCTTTACATCCACTTTTGAGGCAGAAATTGGAACTTTGGGAGGAAAATTTGAGTGCCTCTGTCAGTCTTCAAGTTTTGGAGGTGACTGAGAAATTCTCCATGATGGCTTCATCCCATAGCATTGCCACTGATTATGGAAAACTTGATTGCATAACTACTGTATTCATGAGCTTTTTATCGAGAAATCAGCCATTGACTTTTTGGAAAGCATTTTTTCCTGTATTTAACAGTGTATTTGATTTACACGGGGCAACTTTGATGGCAAGGGAAAATGATCGTTTTCTAAAGCAAGTGACTTTCCATCTCCTTCGACTTGCAGTTTTCCGTAATGAAAACGTAAGGAAAAGGGCAGTTGTTGGGCTCCAAATACTTGTGAGGAGTTCATTTCATTACTTTATGCAGACAGCTAGACTGAGAGTCATGTTGATTATCACATTATCAGAGCTAATGTCTGATGTCCAAGTGACTCAGATGAGATCTGATGGAAGCCTAGAAGAAAGTGGTGAGGCACGGAGACTTAGGAAGTCTTTAGATGAAATGAAGGATGAAAGTAAAAATGCTTACCTGTTGAAGGAGTGTGGATTGCCTGAGAATGCTCTTGTAACCATACCAGAAAAAATGACAGAAAATAGATGGTCCTGGTCTGAGGTGAAATATCTCTCTGACAGTCTTCTTTTGGCCCTTGATGGTAGCTTGGAGCATGCGCTACTGGCCCCCATGATGACTATGGATAGGTATGCTGCTGCTGAAAGCTTCTATAAACTGGCCATGGCATTTGCCCCAGTCCCTGATCTTCACATAATGTGGTTGCTTCATCTATGTGATGCACATCAGGAAATGCAGTCATGGGCAGAAGCTGCTCAGTGTGCTGTTGCAGTTGCTGGAGTTGTAATGCAGGCCCTTGTTTCAAGAAATGATGGTGTTTGGAGCAAAGACCATGTTGCTGCTTTACGTAAGATATGTCCTATGGTCAGCAATGAGATCACGTCTGAAGCATCTGCTGCCGAGGTTGAGGGATATGGTGCTTCAAAACTAACTGTTGACTCTGCTGTGAAATACCTGCAGCTTGCTAATAAGCTCTTCTCACAAGCTGAGCTTTTCCATTTCTGTGCAAGCATTCTGGAACTTGTAATCCCAGTTTACAAGAGCAGGAGGGCTTATGGACAGCTAGCTAAATGTCACACTTTACTGACCAATATCTATGAATCAATTCTTGAACAGGAATCTAGTCCAATTCCTTTCACTGATGCAACGTACTACAGGGTTGGATTTTATGGTGATAGATTTGGGAAACTTGATAAAAAGGAGTATGTATATCGTGAGCCACGTGATGTACGTCTAGGTGACATAATGGAAAAGCTTAGTCACATATACGAGTCTAGAATGGATGGTAATCACACTTTGCATATTATTCCAGATTCTAGACAAGTGAAGGCAGAGGAGTTACAGCCTGGTGTCTGTTACCTTCAGATTACCGCTGTTGATCCTGTCATGGAAGATGAGGATTTAGGAAGTAGGAGGGAAAGAATTTTCTCTCTTTCTACTGGAAGTGTTCGGGCCCGCGTATTTGACCGATTCTTGTTTGACACCCCATTTACTAAAAATGGCAAGACTCAAGGTGGATTGGAAGATCAATGGAAGAGACGCACTGTTCTTCAGACTGAGGGTTCTTTTCCAGCTTTAGTAAATAGGTTATTAGTCATCAAATCCGAGTCTCTTGAATTCTCTCCTGTAGAAAATGCTATCGGAATGATTGAAACACGAACAGCTGCATTAAGAAATGAGCTTGAAGAGCCTCGAAGTTCTGAGGGGGATCAACTTCCAAGACTCCAGAGTCTACAAAGAATCCTCCAAGGCAGTGTTGCAGTACAAGTGAATAGTGGAGTCTTGAGTGTTTGCACAGCCTTCTTGTCTGGGGAGCCTGCGACAAGGTTGCGATCACAAGAACTTCAGCAACTCATAGCAGCCCTTCTTGAGTTCATGGCTGTTTGCAAACGTGCCATCCGCGTACATTTCAGATTGATTGGTGAGGAAGATCAGGATTTCCATACTCAACTTGTAAATGGATTCCAGTCCCTAACAGCTGAGTTATCACATTACATTCCTGCCATTCTCTCAGAGCTATGA 5436 0.4299 MLHLRHRRDSTPATTRWRNTFEENLEQWPHLNELVHCYTTDWVKDENKYGHYDTVGTPSFHNQIYEGPDTDIETEMRLAGARRTKGDDEDDIPSTSGRQFTEGADGDLLHSDVQKHIGQSPLPAYEPAFDWENERALIFGQRIPETPLSHGMKISVKVQSLQFQAGLVEPFYGTICLYNRERREKLSEDFYFHVLPTETQDAKIQSEPRAVFYLDVPSASVCLLIQLEKHATEEGGVTASVYSRKDPVHLTEREKQKLQVWSKVMPYKESFAWTMVSLFDSSIGAASVGPASPSSPLAPSVSGSSSHEGVFETSAKISLDGKMSYSNGNSVVVEVSNLNKVKESYTEESLQDPKRKVHKPVKGVLRLEIEKHQISQADLENMSESGSITNDSVDPGDRIADSLSVSGNGTTQHGISDFNADDFHAFDFRTTTRNEPFLQLFHCLYVYPLTVSLGRKRNLFIRVELREDDGDIRRQPLEAIYPRDPGLDASFQKWGHTQVAAGARVACYHDEIKLSLPATWTPNHHLLFTLFHVDLQTKLEAPKPVVIGYTALPLSSHAQLRSEINLPIMRELVPHYLQDAGRERLDYLEDGKSVFRLRLRLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKNVDSTALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNIVTRVQQESVDDAERNHFLVNYVDCAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMALEKTRLFYHSLPIGEDIPPMQLKDGVFRCIMQLYDCLLTEVHERCKKGLSLAKRLNSSLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHECKLTFLQIICDHDLFVEMPGRDPSDRNYLSSVLIQELFITWDHEDLSLRAKAARILVVLLCKHEFDVRYQKPEDKLYIAQLYFPLVGQILDEMPVFYNLNSVEKREVSIVILQIVRNLDDASLVNAWQQSIARTRLFFKLMEECLLLFEHKKPADGMLLGSSSRNPVGEAPTSPKYSDKLSPAINNYLSEASRQDVRPQGTPDNGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHPLLRQKLELWEENLSASVSLQVLEVTEKFSMMASSHSIATDYGKLDCITTVFMSFLSRNQPLTFWKAFFPVFNSVFDLHGATLMARENDRFLKQVTFHLLRLAVFRNENVRKRAVVGLQILVRSSFHYFMQTARLRVMLIITLSELMSDVQVTQMRSDGSLEESGEARRLRKSLDEMKDESKNAYLLKECGLPENALVTIPEKMTENRWSWSEVKYLSDSLLLALDGSLEHALLAPMMTMDRYAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVSRNDGVWSKDHVAALRKICPMVSNEITSEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELFHFCASILELVIPVYKSRRAYGQLAKCHTLLTNIYESILEQESSPIPFTDATYYRVGFYGDRFGKLDKKEYVYREPRDVRLGDIMEKLSHIYESRMDGNHTLHIIPDSRQVKAEELQPGVCYLQITAVDPVMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL 1811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01704 1811 MobiDBLite consensus disorder prediction 81 105 - -
Cca04g01704 1811 CDD DHR2_DOCK 1367 1800 - -
Cca04g01704 1811 PANTHER LD20667P 19 1803 - -
Cca04g01704 1811 Pfam DHR-2, Lobe A 1356 1509 IPR046769 -
Cca04g01704 1811 Gene3D C2 domain 442 611 IPR035892 -
Cca04g01704 1811 Pfam DHR-2, Lobe B 1577 1659 IPR046770 -
Cca04g01704 1811 MobiDBLite consensus disorder prediction 81 95 - -
Cca04g01704 1811 ProSiteProfiles C2 DOCK-type domain profile. 441 602 IPR027007 -
Cca04g01704 1811 SUPERFAMILY ARM repeat 640 1235 IPR016024 -
Cca04g01704 1811 Pfam C2 domain in Dock180 and Zizimin proteins 440 610 IPR027007 -
Cca04g01704 1811 Gene3D - 1361 1514 IPR043161 -
Cca04g01704 1811 ProSiteProfiles DOCKER domain profile. 1360 1809 IPR027357 -
Cca04g01704 1811 Pfam DHR-2, Lobe C 1706 1803 IPR046773 -
Cca04g01704 1811 PANTHER DEDICATOR OF CYTOKINESIS DOCK 19 1803 IPR026791 GO:0005085|GO:0007264
Cca04g01704 1811 Gene3D - 1679 1806 IPR043162 -
Cca04g01704 1811 SUPERFAMILY ARM repeat 634 952 IPR016024 -
Cca04g01704 1811 CDD C2_DOCK180_related 440 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01704 Cca-Chr4 28367070 28405054 Proximal