Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01693 ATGGGAGAAGAGGTGGTTTTGTTGGATTTTCAACCAAGTATGTTTGGTATGAGAGTTAGGATTGCATTGGCAGAAAAAGGTGTTGAGTATGTGTATAAAGAAGAAAACTTGAGGAATAAGAGTCCCTTGCTTCTTAAGAACAACCCCATTCACAAGAAAATTCCAGTTCTAATTCACAATGGAAAATCCATTTGTGAGTCTCTCAATATTGTTGAGTATATTGATGAGTTTTGGAAGGATAAAGCTCCATTGTTGCCCTTTGATCCTTATGATAGAGCTCAAGCTAGGTTCTGGGCTGATTTTATTGATAAGAAGGTGCATGAAGATGGGAGAGGGATATGGGCCTCAAAAGTAGATCAACATGAGAAGGCCCAGAAGGAACTGAAGGGAAGCTTGAAGCAACTAGAAGAGGTTCTTGGAGACAAGCCATATTTTGGGGGTGACTCATTTGGGTTTCTAGATGTTGCTTTAATCCCTTTCCATCAATGGTTTTATGCTTATGAGAAAGTGGGTAGTTTCAAATTGGACTGTCCCAAACTCATAGGATGGGCCAAGAGATGTTTGCAGAGGGAAAGTGTGTCCACATCCCTTGCCAGTGAAAAGGACATCTATGAGTTTGTTTTGGGCTATAGGAAAACTCATGAGTTGGACTAG 654 0.4052 MGEEVVLLDFQPSMFGMRVRIALAEKGVEYVYKEENLRNKSPLLLKNNPIHKKIPVLIHNGKSICESLNIVEYIDEFWKDKAPLLPFDPYDRAQARFWADFIDKKVHEDGRGIWASKVDQHEKAQKELKGSLKQLEEVLGDKPYFGGDSFGFLDVALIPFHQWFYAYEKVGSFKLDCPKLIGWAKRCLQRESVSTSLASEKDIYEFVLGYRKTHELD 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01693 217 Gene3D - 88 217 - -
Cca04g01693 217 Pfam Glutathione S-transferase, C-terminal domain 119 191 IPR004046 -
Cca04g01693 217 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Cca04g01693 217 Coils Coil 118 138 - -
Cca04g01693 217 CDD GST_N_Tau 5 78 - -
Cca04g01693 217 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Cca04g01693 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 213 IPR045073 -
Cca04g01693 217 Gene3D Glutaredoxin 1 87 - -
Cca04g01693 217 SFLD Glutathione Transferase (cytosolic) 2 214 IPR040079 -
Cca04g01693 217 SFLD Main.3: Omega- and Tau-like 2 214 IPR045073 -
Cca04g01693 217 CDD GST_C_Tau 89 210 IPR045074 GO:0004364|GO:0006749
Cca04g01693 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cca04g01693 217 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 3 213 - -
Cca04g01693 217 SUPERFAMILY GST C-terminal domain-like 76 212 IPR036282 -
Cca04g01693 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 210 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01693 Cca-Chr4 28110127 28111721 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01693 1 212 Glutathione S-transferase Gene Family AT1G17180 60.748 9.81e-94 271