Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01678 ATGGTGTACAGTGGAGCTGTTGATAGAATAATTGGGAGGCCGCCACCTAAGACTGGAGATATTGTTGTGGTAGCAGATGGGACTGAGAGACCAATTGGATGGGGCATGTACAACTCAGTTTCCATGTTCTGTGTTCGGCTCATGCAGCTTGAAGATGAGGCTAACAGTGATTCATCTTGTGCATTGAATATGGAGAAGCTGATTGAAACAAGAGTTGATGCAGCTGTTGAATTGCGTAGAAGGTTGGGTCTTCCATCAGTCCACACAAATGCATATCGTCTAATCAATAGTGAAGGTGACAGATTATCAGGATTGATAATTGACGTCTTTGGAGATGTAGCTGTTGTAGCGTCATCTGCTGCTTGGGTTGAGAAATACAAATCAGAGATCGAGGCATGCATCACGAAAATCAACTATATCAATCATATAAAATGGAGGCCATCTGTTGATATTTTAAAGGAAGATGGAGTTAATGTATCAAATTTAAAGGAAGTATGTTCATCTACATGTCCTGAAAGAACAAAGATTGTGGAAAATGGAATTGTTTACACAATTTCACTGAATGGCCAGAAGACGGGGTTCTATGCTGATCAGCGTGAGAATCGTCAGTTTATATCAAGAATTTCAGATGGGCAAAAGGTTCTTGATCTTTGCTGCTATAGTGGGGGTTTTTCTCTAAATGCAGTGCGTGGAGGTGCTCTAAATGTCACTGGTATTGACACATCACTGCTAGCTTTGGAGCTAGCTAAAGAAAATGTTGTACTCAACAACATTGATCCGGGGAAAATATCCTTTTTGAGAGAAGATGCATCTGAATTTATGAAGGGTGCTATCTTGAGAAATGAATCCTGGGATATTGTCATCATTGATCCTCCTAAACTTGCACCAACAAAAAAGGTTCTACACAGTGCATCTGGTATGTACAGGAATTTGAATTCGCTCGCCATGCAACTTACTAAAAGAGGTGGTCTTCTGATGACCTGTTCCTGTTCTGGAGCTGTGACCCAAAGTGGGATATTCCTGCGTATACTTCAGGGTGCAGCATCTATGGCAGGTAGGAAAATCACTGTTCTTAGACAGGCTGGAGCAGCTTGTGATCATCCTATTGATCCATCATATCCCGAAGGCGCATACTTATCAAACATTCTTTTAAGAGTTTCATGA 1164 0.4124 MVYSGAVDRIIGRPPPKTGDIVVVADGTERPIGWGMYNSVSMFCVRLMQLEDEANSDSSCALNMEKLIETRVDAAVELRRRLGLPSVHTNAYRLINSEGDRLSGLIIDVFGDVAVVASSAAWVEKYKSEIEACITKINYINHIKWRPSVDILKEDGVNVSNLKEVCSSTCPERTKIVENGIVYTISLNGQKTGFYADQRENRQFISRISDGQKVLDLCCYSGGFSLNAVRGGALNVTGIDTSLLALELAKENVVLNNIDPGKISFLREDASEFMKGAILRNESWDIVIIDPPKLAPTKKVLHSASGMYRNLNSLAMQLTKRGGLLMTCSCSGAVTQSGIFLRILQGAASMAGRKITVLRQAGAACDHPIDPSYPEGAYLSNILLRVS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01678 387 Gene3D Vaccinia Virus protein VP39 174 387 IPR029063 -
Cca04g01678 387 Gene3D PUA domain 1 53 IPR036974 GO:0003723
Cca04g01678 387 CDD RlmI_M_like 67 156 - -
Cca04g01678 387 CDD AdoMet_MTases 213 328 - -
Cca04g01678 387 Pfam PUA-like domain 2 48 IPR041532 -
Cca04g01678 387 Pfam S-adenosylmethionine-dependent methyltransferase 163 343 IPR019614 GO:0008168
Cca04g01678 387 Gene3D RNA methyltransferase domain (HRMD) like 64 171 - -
Cca04g01678 387 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 70 382 IPR029063 -
Cca04g01678 387 PANTHER RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE 1 386 - -