Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01661 ATGGCGAAGAAGGCGGTTTTGATCGGAATCAACTACCCAGGAACGAAGGCGGAGCTGAGAGGGTGCGTAAACGACGTGTGGAGGATGCAGCGGTGTCTGGTGGAGCGATACGGGTTCTCGGAAAACGACATAACCGTTTTGATCGACACGGACAAGGCGTATAGGGAGCCAACGGGGAAGAACATTCGGTCAGCGTTGACAAGGCTGATAGGGACGGCGAGAGGAGGGGACGTTCTGTTCGTGCATTACAGCGGACACGGCACTCGCCTCCCTGCGGAAACGGGAGAGGAGGATGACACTGGATATGATGAATGCATTGTTCCTTCCGATATGAACCTCATCACTGATGATGATTTCAGGGAATTTGTAGAAGGGGTGCCTAGAGATTGCAAGCTCACAATAGTATCAGACTCTTGCCATAGTGGTGGCCTAATTGACGGGGCTAAGGAGCAGATAGGAAATAGTACAAAAGGAGAAGGGCACCATTCTGGTTCTGGGTTTGGATTGTCCAGTTTTCTTCGTCGTACTGTGGAAGATGCCATCGAGTCTCGTGGAATTCATATCCCTTCAGTATTGCGCCATCATGGACACAAGAATGACGTTGAAGCTGATGATAGGGACATTGAACTTCCACATGAGCACTATGGCTATGTAAAGAATAGATCATTGCCACTTTCTACCATCATAGACATACTGAAGCAGAAAACTGGGAAAAATGATATAGACATCGGGAAACTGAGACTTACACTTTATGATATTTTTGGGGAAGATGCTAGCCCTAAAGTAAAGAAGTTCATGAAGGTTATCTTGAATAAACTCCAACATGGAGATGGTGGAAGTGAAAAACATGGTGGAATATTGGGGTTGGTGGGTAGTCTTGCTCAAGAGTTTCTCAAGCAAAAGCTTGATGCAAACGATTATGGGTATGCAAAACCTGCCATGGAGACAAAGGTAGAAAATAAATATGAGGCATATGCTGGTTCAACCACACACCGCCTGCCAGAAGGTGGAATTCTGATGAGCGGTTGTCAGACGGATCAAACTTCTGCAGACGCAAGTCCTTCAGTCACAAATCAAGAGCTTGTTTTGAAGGCAAGAGAGAAGCTGAAGAGGGGAGGTTTCACCCAACAACCAGGACTCTATTGCAGTGATCAACATGTTGATGGCCTGTTCGTGTGCTGA 1182 0.4687 MAKKAVLIGINYPGTKAELRGCVNDVWRMQRCLVERYGFSENDITVLIDTDKAYREPTGKNIRSALTRLIGTARGGDVLFVHYSGHGTRLPAETGEEDDTGYDECIVPSDMNLITDDDFREFVEGVPRDCKLTIVSDSCHSGGLIDGAKEQIGNSTKGEGHHSGSGFGLSSFLRRTVEDAIESRGIHIPSVLRHHGHKNDVEADDRDIELPHEHYGYVKNRSLPLSTIIDILKQKTGKNDIDIGKLRLTLYDIFGEDASPKVKKFMKVILNKLQHGDGGSEKHGGILGLVGSLAQEFLKQKLDANDYGYAKPAMETKVENKYEAYAGSTTHRLPEGGILMSGCQTDQTSADASPSVTNQELVLKAREKLKRGGFTQQPGLYCSDQHVDGLFVC 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01661 393 Pfam Caspase domain 3 360 - -
Cca04g01661 393 SUPERFAMILY Caspase-like 6 135 IPR029030 -
Cca04g01661 393 PANTHER METACASPASE-4 356 393 - -
Cca04g01661 393 PANTHER METACASPASE-4 1 355 - -
Cca04g01661 393 Gene3D - 303 389 - -
Cca04g01661 393 Gene3D - 1 173 - -
Cca04g01661 393 PANTHER METACASPASE-5 356 393 - -
Cca04g01661 393 PANTHER METACASPASE-5 1 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01661 Cca-Chr4 26385111 26386877 Proximal