Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01658 ATGGCTAAGATAGAAAGTGTTCATGACTTCCTCGAAGGAAAGACCATTTTTGTCACCGGTGCAACGGGGTTTTTAGGAAAAGTTTTTATAGAAAAGATATTAAGAGTACAGCCAAACATAAAAAAATTATACCTTCTTATAACATCAAATTCAGATTTAGCTACCCACCGCTGGCACGATGAGGTCATGGGGAAGGACTTATTCAGGGTTCTACGATATAAATGGGGTTCAGATTTTGGTTCTTTTATATCAAAGAAAGTAGTTGTTGTTGCTGGTGATGTTTCTGATCAGAACTTGGGAATTAAGGATAAAAACACGAGGAGGCTAATGTTGGAAGAGTTAGATATTATAGTGCATAGCGCTGCAACTACCAATTTGAATGAGAGATACGATATAGAAATGGAAACTAACACGATGGGAGCTTTTCATGTTGCGAACTTTGCTAAGAATTGTCCTAAATTGGAGATTGTTCTCCATGTATCTACCG 487 0.3737 MAKIESVHDFLEGKTIFVTGATGFLGKVFIEKILRVQPNIKKLYLLITSNSDLATHRWHDEVMGKDLFRVLRYKWGSDFGSFISKKVVVVAGDVSDQNLGIKDKNTRRLMLEELDIIVHSAATTNLNERYDIEMETNTMGAFHVANFAKNCPKLEIVLHVST 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01658 162 Gene3D - 3 162 - -
Cca04g01658 162 PANTHER MALE STERILITY PROTEIN 2-RELATED 7 162 IPR026055 GO:0080019
Cca04g01658 162 PANTHER FATTY ACYL-COA REDUCTASE 7 162 - -
Cca04g01658 162 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 162 IPR036291 -
Cca04g01658 162 Pfam Male sterility protein 18 162 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01658 Cca-Chr4 26300493 26313715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01658 6 162 Acyl Lipid Metabolism Gene Families AT3G44560 55.975 4.36e-52 170