Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01651 ATGTGCAGCTCCAAGACCAAAGTGACTCTAGGCATAGAAGCCACAAACACAGCCACATCTCCTGTGGCCAGAATCAATGGCAGGCCAGTCCTTCAACCAACATGTAACCGAGTTCCTAACCTTGAGAGGAGAAATTCAATAAAAAAAGTGTCACCAAAATCTCCTTCTCCCCCATCACCACCAAACAAGACCTCATTGACACCTCCAATTTCTCCAAAGCCTAAGTCCCCAAGGCCTCCAGCAATAAAGCGAGGCAACGAGAGCAATGGACTGAACTCAAGTTCTGAAAAGATTGTGACCCCAAGAAACACCACAAAAACTCCATCAACTCTAGAGAGGAAAAAGTCCAAGAGTTTTAAGGAGGCATCATTAAGTTACTCTTCCTCTTTGATCACTGAATCCCCAGGGAGCATAGCAGCAGTGAGGAGAGAACAGATGGCACTGCAGCATGCAGAGAGGAAAATGAAGATTGCACATTATGGAAGATCAAAGTCTGCTAAGTTTGAAAAAGTTGTTCCTCTTGATACTTCAGCCAATCTTACCTCAAAGACAAGTGAGGAGGAGAAGAGATGCAGCTTTATCACAGCCAATTCAGATCCCATCTATATTGCTTATCATGATGAAGAATGGGGAGTTCCAATTCATGATGACAAGATGTTGTTTGAACTTCTAGTTTTAAGTGGTGCTCAGGTTGGATCCGATTGGACCTCAATCTTGAAGAAACGCCAGGATTTCAGGACTGCATTTTCAGAATTTGATGCATCAACTTTGGCCAACTTGACCGATAAACAAATGATGTCTATTAGTTTGGAATATGGCATTGATATAAGCAGAGTTCGAGGTGTTGTTGATAATGCTAACCGAATTTTAGAGATTAACAAGGACTTTGGTTCATTTGACAAATATATTTGGGGTTTTGTCAATCACAAACCCATCTCCACGCAATACAAGTTCGGCCACAAGATCCCAGTGAAGACGTCAAAATCAGAGAGCATGAGCAAAGACATGATCAGAAGGGGCTTTAGGTTTGTAGGTCCAACAGTCCTACATTCATTTATGCAAGCAGCTGGACTCACCAATGACCACTTAATCACTTGCCATAGACACTTGCAATGCACCTTATTGGCATCTCAATAG 1137 0.4248 MCSSKTKVTLGIEATNTATSPVARINGRPVLQPTCNRVPNLERRNSIKKVSPKSPSPPSPPNKTSLTPPISPKPKSPRPPAIKRGNESNGLNSSSEKIVTPRNTTKTPSTLERKKSKSFKEASLSYSSSLITESPGSIAAVRREQMALQHAERKMKIAHYGRSKSAKFEKVVPLDTSANLTSKTSEEEKRCSFITANSDPIYIAYHDEEWGVPIHDDKMLFELLVLSGAQVGSDWTSILKKRQDFRTAFSEFDASTLANLTDKQMMSISLEYGIDISRVRGVVDNANRILEINKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESMSKDMIRRGFRFVGPTVLHSFMQAAGLTNDHLITCHRHLQCTLLASQ 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01651 378 MobiDBLite consensus disorder prediction 86 107 - -
Cca04g01651 378 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE I 1 377 - -
Cca04g01651 378 MobiDBLite consensus disorder prediction 1 126 - -
Cca04g01651 378 Gene3D Hypothetical protein; domain 2 188 372 - -
Cca04g01651 378 PANTHER OS04G0501200 PROTEIN 1 377 - -
Cca04g01651 378 MobiDBLite consensus disorder prediction 53 79 - -
Cca04g01651 378 SUPERFAMILY DNA-glycosylase 189 372 IPR011257 GO:0003824|GO:0006281
Cca04g01651 378 MobiDBLite consensus disorder prediction 1 23 - -
Cca04g01651 378 Pfam Methyladenine glycosylase 196 369 IPR005019 GO:0006284|GO:0008725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01651 Cca-Chr4 26074956 26077984 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01502 10 24107473 24110544 Cca04g01651 04 26074956 26077984 PCT