Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01647 ATGGGGTACCAAAACACAAAAGCCCTATCACACTTGGTGATGTTGCTAACATCAATGATAGTTGGCATTGCAATGGGAGACACATCGAAGGACAAAGAGGAATGCACTCAGCAATTGGCGGGGCTATCACCATGCTTGCCTTATGTTGCTGGTCAAGCAAAAGCACCAGCCCCAGATTGTTGTAGTGGTCTCAAGCAAGTTCTCAAGAACAACAAAAAGTGTTTGTGTCTCATTATCAAAGATCGCAATGATCCTGACCTTGGTGCTTTGCAGATTAATGCTACTCTTGCTTTGAACCTCCCAACAGCTTGCAATTCCCCTGTCAATGTCTCCAAGTGCCCCGAGCTGCTGCACATGGATCCCAAATCACCAGATGCTCAAGTTTTTTATCAATTGGAGAAAGGCTCCAGCAAAAGTGGCACAAGTCCTGCCCCAAGTCCTTCTGCTGGAACAAGTTCTTCAATCAGCCAGACAGCCAGTACCCCACAGAAGAATGATGCATTCTACAAGGAGAAGAGATTGTTTGGGCAACATTTTTGGGCTTCTGGGCTTCTAGTTTGGGCTTTTATTGGGCTCTTCTGCTAG 585 0.4615 MGYQNTKALSHLVMLLTSMIVGIAMGDTSKDKEECTQQLAGLSPCLPYVAGQAKAPAPDCCSGLKQVLKNNKKCLCLIIKDRNDPDLGALQINATLALNLPTACNSPVNVSKCPELLHMDPKSPDAQVFYQLEKGSSKSGTSPAPSPSAGTSSSISQTASTPQKNDAFYKEKRLFGQHFWASGLLVWAFIGLFC 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01647 194 MobiDBLite consensus disorder prediction 135 160 - -
Cca04g01647 194 PANTHER PROTEIN YLS3 11 186 - -
Cca04g01647 194 CDD AAI_LTSS 42 105 - -
Cca04g01647 194 SMART aai_6 35 113 IPR016140 -
Cca04g01647 194 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 34 114 IPR036312 -
Cca04g01647 194 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 11 186 IPR043325 -
Cca04g01647 194 Pfam Probable lipid transfer 17 113 IPR016140 -
Cca04g01647 194 Gene3D - 32 113 IPR036312 -
Cca04g01647 194 PRINTS Plant phospholipid transfer protein signature 34 50 IPR000528 GO:0006869|GO:0008289
Cca04g01647 194 PRINTS Plant phospholipid transfer protein signature 55 69 IPR000528 GO:0006869|GO:0008289
Cca04g01647 194 PRINTS Plant phospholipid transfer protein signature 91 108 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01647 Cca-Chr4 25823731 25825424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01647 1 193 Acyl Lipid Metabolism Gene Families AT2G44300 49.758 7.40e-62 189