Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01645 ATGACGATCGAACGAATTGTGGTGAAGAGTCCGTGTGGTTTCGTTGCGGCTGCTGGTGCTACTGATGAAGAAGATATGGAGAGTTCGTACTTGAAGAGGCAGGAACAGAAGGACGTCCACGTCGACGAGGGCAGAAGCGAAAGGAGCCCATGTTTGGGCAAACATGTTCTGCTGTTTCCACCCACATCTGAATCAATTAGTACCATAGCTTCTGAACACTTAAAAGTGGGTCGATTTCATGAAATTTATCACTCCGAGCTCTCACCCATTTCCCCCGTTCAACTAAAATCCGTCGGCATTGTAATGGTCAGTGACATAGGGGAGCACCAGGTGTCGCTAAGGTACCCAAGCCTTCAATCACTTCGCATGCACTTCAGCGACCAAAACTTTGAGAAGCCAGACGGGAAGAAGATCCCTGCACTCGACGAGAAGTACGTGATGGGGTTGGACTTCGCCACCAAAGCGCTTTCCAGGAGCATCCCAACTGAGGAATTTGAACAAAAAAAAAGCTCTTGGAGCTTCTGGGTCTCTCCCTCTAAAGAACACATTCAAGACTATGAAAATCCAGCTCTCATTGATGCCGCAAGGAGTATCATTTCAAAACAGGGTTCTTGCTGGTCTCAGCTCAAGTTCTCAGGGATGATGCAGTGGGGCAAACGCCGACAAGTTCGGTTCTTGGGCCGTCATGAGGAGAAAAAGGTTGAATCTTTTTCGAAACTGTGTAAGGAAAAAAGTGTCAGTGATGAACTCAGAGAAGGGACTAATgaaaagaagaggaagaaaggtgaagaagaaACGGAGGCTACCAAGGAAGAGTCTTTTGCGGTTATGAGGATGACTCGTCAATGTAAAAAAAATCATCAAAATGTAAGTAGTAGCAGTGGGGTTCCAAAATCTAAGAAAGCAAAGAATGACCCCAAGAAGCTGCAACTCGTACTTTACAACAAAAATAAGCGAAAAATCTCAATTGACAGATGGTCTGCTGAGAGGTATAACTTGGCAGAGGAGAACATGTTAAAGGTTATGAGAGAAAAAGGAGCTGTGTATGGAAATCCAATATTGAGGCCAGACTTGAGATCGGAAGCACGAAAATATATTGGTGACACGGGTCTGCTAGATCATTTGCTGAAGCACATGGCTGGAAAAGTCGCACCCGGAGGTGCTGAGAGATTCCGACGGCGACACAATGCGGAGGGTGCAATGGAATACTGGTTAGAGAGTGCTGATCTTGTTGATATTAGAAGGGATGCAGGGGTACAAGACCCTTACTGGACTCCTCCCCCTGGATGGAAGCTCGGGGACAGCACTACGCAAGATTACGTTACTGGTAGAGAACTCAAAGAGATCAAAGAAGAAATCCTCAAGTTGAAAGAAGATATGCGTGAGCTAGCATCTAAGAAGGGCGACGATACATTAGCCATAGTGACTACTCCTAGTTCCTGTTTGTCTACTTTGAATTCGGAGGACTATGGTTCCTTGGCTCCTAAGCAGGAGATTTATGCGGAATTGGTGACTAAGAAGGCTAAAATAGAGGAACAATTGAAGGAAATTTCACTGACTTTGAGTGGCATGGAGGAGCAACTGAGAATGCTGAAACCATCAATATTAGAAGAACAAATAATGTCAGAATCGGTAACCCCAACGGCATTTTTGCCTGGACCAACATCAGTGGCAGAAAACTTTGGAGGAGACACAAGGAAGGAAAAGAAAAGCAACAAGAGCAAAGCAGCAACAAAATCACAAATGCAGGAAATAAGTACAGCGGAGGACAAGGCTGCAAAGATAGAAAGGCTGAAAAGTGGCTTCCAAATTTGCAAGCCACATGGGACCTTTGTATGGCCAAATATAGGTCTGTCTCCCCTCAACTATGATGATCACACTGTGGTCCCAACCCCAACATCAGCTTCCTCTTCCACCACCTCAGCTCCAAAACTCATCTCAAAACCCCAGATTCAGCACTTGTCATTGCCATCACCTAACCCTTCTTCCCCTGTAAAACCACTAGCAGAGAGGCGCCCTGTGAGCACTGCTACTTTGTCCCATGTAACTGGGCCATTCTCCCCTCGCCTTCCTCCACCATTATCCAAAATCATCACCACCTTCACTATTAACCTCAATGAGACCCCTTTCACCCTAGAGTAG 2142 0.4533 MTIERIVVKSPCGFVAAAGATDEEDMESSYLKRQEQKDVHVDEGRSERSPCLGKHVLLFPPTSESISTIASEHLKVGRFHEIYHSELSPISPVQLKSVGIVMVSDIGEHQVSLRYPSLQSLRMHFSDQNFEKPDGKKIPALDEKYVMGLDFATKALSRSIPTEEFEQKKSSWSFWVSPSKEHIQDYENPALIDAARSIISKQGSCWSQLKFSGMMQWGKRRQVRFLGRHEEKKVESFSKLCKEKSVSDELREGTNEKKRKKGEEETEATKEESFAVMRMTRQCKKNHQNVSSSSGVPKSKKAKNDPKKLQLVLYNKNKRKISIDRWSAERYNLAEENMLKVMREKGAVYGNPILRPDLRSEARKYIGDTGLLDHLLKHMAGKVAPGGAERFRRRHNAEGAMEYWLESADLVDIRRDAGVQDPYWTPPPGWKLGDSTTQDYVTGRELKEIKEEILKLKEDMRELASKKGDDTLAIVTTPSSCLSTLNSEDYGSLAPKQEIYAELVTKKAKIEEQLKEISLTLSGMEEQLRMLKPSILEEQIMSESVTPTAFLPGPTSVAENFGGDTRKEKKSNKSKAATKSQMQEISTAEDKAAKIERLKSGFQICKPHGTFVWPNIGLSPLNYDDHTVVPTPTSASSSTTSAPKLISKPQIQHLSLPSPNPSSPVKPLAERRPVSTATLSHVTGPFSPRLPPPLSKIITTFTINLNETPFTLE 713
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01645 713 MobiDBLite consensus disorder prediction 652 671 - -
Cca04g01645 713 MobiDBLite consensus disorder prediction 552 587 - -
Cca04g01645 713 MobiDBLite consensus disorder prediction 20 47 - -
Cca04g01645 713 MobiDBLite consensus disorder prediction 283 299 - -
Cca04g01645 713 Coils Coil 446 466 - -
Cca04g01645 713 Coils Coil 500 527 - -
Cca04g01645 713 PANTHER PROTEIN DYAD 69 684 - -
Cca04g01645 713 MobiDBLite consensus disorder prediction 283 306 - -
Cca04g01645 713 MobiDBLite consensus disorder prediction 25 47 - -
Cca04g01645 713 PANTHER PROTEIN DYAD 69 684 IPR044221 GO:0007131|GO:0051177|GO:0051321
Cca04g01645 713 MobiDBLite consensus disorder prediction 248 270 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca04g01645 Cca-Chr4 25769311 25773933 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01645 315 406 PHD Transcription Factor Family AT5G22260 37.113 7.21e-06 47.4