Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca04g01619 | ATGTCACTTGCTGGTAAAATCACCTCTGAAATTGGGGTTCATGCAACCGCTGCCAAGTGGTTCAACCTCTTTGCCACACAACTTCATCATGTTCAAAACCTCACTGATAGGGTTCATGCTACCAAGCTGCATCATGGTAATGACTGGCATCACAATGAGTCCGTCAAACACTGGACTTATACCATAGATGGTAAGGTTACAACATGTCTGGAGAGTATTGAATCCGTTGATGAACAGAACAAAACAATCACCTACAAGCTCTTTAGTGGAGACATCGATCGCCAGTTTAAGGTCTTTAAGTTCATCTTTCAAGCAATTGATAAGGGTCATGGTGCTATTATCAAATGGACCGTTGAATATGAGAAGAATGATGATGAAGTTGATCCTCCATATGGCTACGTCGAGTACCTGCACACAGGCACTAAAGATATTGATGCTCATCTTCTCAAGGCATAG | 456 | 0.4211 | MSLAGKITSEIGVHATAAKWFNLFATQLHHVQNLTDRVHATKLHHGNDWHHNESVKHWTYTIDGKVTTCLESIESVDEQNKTITYKLFSGDIDRQFKVFKFIFQAIDKGHGAIIKWTVEYEKNDDEVDPPYGYVEYLHTGTKDIDAHLLKA | 151 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca04g01619 | 151 | Pfam | Pathogenesis-related protein Bet v 1 family | 3 | 150 | IPR000916 | GO:0006952 | |
| Cca04g01619 | 151 | SMART | Bet_v_1_2 | 2 | 151 | IPR000916 | GO:0006952 | |
| Cca04g01619 | 151 | PANTHER | PATHOGENESIS-RELATED PROTEIN BET V I FAMILY PROTEIN | 1 | 149 | - | - | |
| Cca04g01619 | 151 | SUPERFAMILY | Bet v1-like | 1 | 150 | - | - | |
| Cca04g01619 | 151 | PANTHER | MLP-LIKE PROTEIN 423 | 1 | 149 | - | - | |
| Cca04g01619 | 151 | Gene3D | - | 1 | 151 | IPR023393 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca04g01619 | Cca-Chr4 | 24830325 | 24832007 | Dispersed/Proximal |