Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca04g01617 | ATGTTCTATATAACCCGTATATGGTTGCCATACTCTCATCCATCTTGCTTTGTTCCATTACTTGCTTCTCTCTTGATCATGTCACTTGTAGGCAAAATCAGCACTGAAATTGGGGTTCACGCAACCGCTGAAAAGTGGTTCGACCTCTTCGCAAAGCAACTCCATCATGTTCAAAACCTTACTGATAGGGTTCATGGAACAGAGCTGCATCATGGTGATGACTGGCATCATACGGAGTCCATCAAACACTGGACTTATACCATAGATGGTAAGGTTACAACATGTAAGGAACGTGTTGAATCCGTTGATGAACAGAATAAAACAATTAACTACAAGCTCTATGAGGGAGATATCGATCATAAGTATAAGGACTTTAAGCTCATCTTTCAAGCCATTGATAAGGATCATGGTGGTGCTATTATCAAATGGACCGTTGAATATGAGAAGATTGATAATGAAGTTGATCCTCCATATGGCTACATCGAGTATGTGCACAAATGCACTAAAGATATTGATGCTCATCTTCTCAAGGCATAG | 537 | 0.4004 | MFYITRIWLPYSHPSCFVPLLASLLIMSLVGKISTEIGVHATAEKWFDLFAKQLHHVQNLTDRVHGTELHHGDDWHHTESIKHWTYTIDGKVTTCKERVESVDEQNKTINYKLYEGDIDHKYKDFKLIFQAIDKDHGGAIIKWTVEYEKIDNEVDPPYGYIEYVHKCTKDIDAHLLKA | 178 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca04g01617 | 178 | Gene3D | - | 27 | 178 | IPR023393 | - | |
| Cca04g01617 | 178 | SMART | Bet_v_1_2 | 28 | 178 | IPR000916 | GO:0006952 | |
| Cca04g01617 | 178 | CDD | Bet_v1-like | 31 | 157 | - | - | |
| Cca04g01617 | 178 | PANTHER | PATHOGENESIS-RELATED PROTEIN BET V I FAMILY PROTEIN | 27 | 176 | - | - | |
| Cca04g01617 | 178 | PANTHER | MLP-LIKE PROTEIN 423 | 27 | 176 | - | - | |
| Cca04g01617 | 178 | SUPERFAMILY | Bet v1-like | 27 | 177 | - | - | |
| Cca04g01617 | 178 | Pfam | Pathogenesis-related protein Bet v 1 family | 28 | 177 | IPR000916 | GO:0006952 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca04g01617 | Cca-Chr4 | 24732863 | 24734574 | Tandem |