Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01609 ATGTCCACCTTGCAATCAAACCTTAACTACGATAATTGCCAGCCTAAATTAGAAACAATGGAGACCCCAGAATCACACATACTGCTTCTTCATCTTCCTGGTTATGCACAAGAAGATATAGGTGCTCAATTTGAGTACGATTATAGAAGAGTTAGGGTTTTTGGTGGACGAGCACTTGGAGATAACAGATCAATCCGCTTCAACATTCTGTATGCTGTTCCTTCGAATTGTGATGTGAATAAGCTTAAGGGTACGTTCCAAGGAGAAATTTATAGTGTCATAATGCCAAAAGTAACTACATCAAAAGAAATCCATGATCAAAATTCACCCAAATCTTCACCACAAGCACCTCAAAAGAGTCAAATGGAAATATGTGAGGAACCAAAATCAACAATTGAGAGTGAAAAAGAAGCTAATGAGACTTCAACCGCACCAAAAGCCACAAATGATATCGTGCCTCAAAAGGGTGAAGGAGTTTCACAAGATGCCAAGAATCAAGCAAAAGAAAAGTGTGCATCAGGAAAACCACCCCCGAAAGGTAACAAGGAACATGTCATGGATGAGACAAGTTTCATCACAAAGTGTGAAGAGAATGGTAAGGATAAGGGCAAAGAAAAAGTGGAAATGAATATTGGATCATCAAAAAGGAAAGGAATAAAAGAGGTGGCTGCTTCTACTTCTCATGTTGTTGCAAAATTGGTAAAGGGATTCAATGAAGAAGATATGATAGTGTTGTACACAAGTGCAACGGTTCTAGTGTTGGCTCTAGGTGTTTATGCTTCTTACAAGTTTCGTTCCTTTAGCTAG 807 0.3879 MSTLQSNLNYDNCQPKLETMETPESHILLLHLPGYAQEDIGAQFEYDYRRVRVFGGRALGDNRSIRFNILYAVPSNCDVNKLKGTFQGEIYSVIMPKVTTSKEIHDQNSPKSSPQAPQKSQMEICEEPKSTIESEKEANETSTAPKATNDIVPQKGEGVSQDAKNQAKEKCASGKPPPKGNKEHVMDETSFITKCEENGKDKGKEKVEMNIGSSKRKGIKEVAASTSHVVAKLVKGFNEEDMIVLYTSATVLVLALGVYASYKFRSFS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01609 268 Gene3D - 12 124 IPR008978 -
Cca04g01609 268 SUPERFAMILY HSP20-like chaperones 12 102 IPR008978 -
Cca04g01609 268 MobiDBLite consensus disorder prediction 101 125 - -
Cca04g01609 268 MobiDBLite consensus disorder prediction 126 140 - -
Cca04g01609 268 MobiDBLite consensus disorder prediction 101 187 - -
Cca04g01609 268 PANTHER PROTEIN, PUTATIVE-RELATED 98 266 - -
Cca04g01609 268 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 8 112 IPR002068 -
Cca04g01609 268 PANTHER PROTEIN, PUTATIVE-RELATED 1 116 - -
Cca04g01609 268 PANTHER HEAT SHOCK PROTEIN 26 98 266 IPR045045 -
Cca04g01609 268 PANTHER HEAT SHOCK PROTEIN 26 1 116 IPR045045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01609 Cca-Chr4 24406205 24408318 Dispersed