Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01604 ATGGAGAGTGAAAACAAGACACATAGAGTGCACTGTTTGATCTTGGCATTTCCACACCAAGGACACATAAACCCTATGCTCCAATTCTCCAAGCGTTTGCATCATGAAGGGGTGAGAGCAACACTTGTCACAAGCCACTTCTACTGCAAGACCCTTCCCAAGTTACCATCTTCCATCACTCTTGAGCCCATTTATGATGGCTATGATGATGGTGGGATTGCACAAGCAGAGAGCATCAAGGCCTACTTGGACCGGTTAAGGAAAATTGGGCCACAAACATTTTCACAACTACTTGAGAGGCTCATTGGTTATGGAAACCCAATTGATTGTGTTGTGTATGACTCCTTCATGCCTTGGGCTCTTGATGTTGCCAAGAAACATGGGCTGGCTTGTGCTGCTTTTCTCACCCAACCCCTCTTTGTTAACTGTGTGTACCATCATGTTCACAAGGGGAATTTGAAACTTCCCTTGTCCAATGATCACAGTGTTGTTTCACTGCCAGGGTTGCCTCTTCTTAAACCAAGTGATTTGCCATCTTTTGTGTATCACTATGGCTCACATCCTGCTTCTTTTCAGCTTCTTGTGGGAGACCAGTTCTCCAACATTGAAAAGGCTGATTGGGTTCTTTGCAATACCTTCTATGAGTTGGAGAAAGAGGTAACAGATTGGTTGATGAAGATTTGGCCAAATTTAAGAACAATTGGACCAACTATACCATCTATGTTTCTAGACAAACGAGTAAAAGATGATAATGAGTATGGCTTCAGTCTCTTCAAGAGTGAAGATCAATGTTTAAAATGGATGGAGAATAAGCCAAAGGGGTCCATTGTTTATGTCTCATTTGGGAGTTTTTCAACCCTTGATGAGGAGCAAATGGAGGAAGTGGCTTTTGGTTTGCAAGAGAGTGGGTGTCACTTCTTGTGGGTGGTTAGGGCTAGTGAAGTGGGTAAGATCCCAAAAGGCTTTGAAAGAAATTCAGAGAAGGGTTTGGTGATAACATGGAGCAATCAATTAAGAGTGTTAGAACATGAAGCACTAGGGTGTTTTGTGACACATTGTGGATGGAACTCCACTTTGGAAGCTTTGAGCTTGGGAGTTCCAATGATTGCCGTGCCACAATGGACAGACCAAACAACAAATGCAAAGCTTGTAGAAGATATTTGGAAAATAGGCCTAAGAGTTCCAATGGATGACAAAGGGGTCTTTAGAAGGGAAGCTTTGAAGCATACTATAGTGAAAATTATGGAGAGTGAGATGGGAATAGTTATCAAGAGAAATGCCATCCAATGGAAGAATTTGGCAGCAAAAGCAGTTGATGAGGGGGGAAGTTCTCATATGAATATTGGAGAGTTCGTGGATAGCTTGGTCCATTCAAAATGA 1380 0.4246 MESENKTHRVHCLILAFPHQGHINPMLQFSKRLHHEGVRATLVTSHFYCKTLPKLPSSITLEPIYDGYDDGGIAQAESIKAYLDRLRKIGPQTFSQLLERLIGYGNPIDCVVYDSFMPWALDVAKKHGLACAAFLTQPLFVNCVYHHVHKGNLKLPLSNDHSVVSLPGLPLLKPSDLPSFVYHYGSHPASFQLLVGDQFSNIEKADWVLCNTFYELEKEVTDWLMKIWPNLRTIGPTIPSMFLDKRVKDDNEYGFSLFKSEDQCLKWMENKPKGSIVYVSFGSFSTLDEEQMEEVAFGLQESGCHFLWVVRASEVGKIPKGFERNSEKGLVITWSNQLRVLEHEALGCFVTHCGWNSTLEALSLGVPMIAVPQWTDQTTNAKLVEDIWKIGLRVPMDDKGVFRREALKHTIVKIMESEMGIVIKRNAIQWKNLAAKAVDEGGSSHMNIGEFVDSLVHSK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01604 459 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 8 456 - -
Cca04g01604 459 ProSitePatterns UDP-glycosyltransferases signature. 334 377 IPR035595 -
Cca04g01604 459 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 456 - -
Cca04g01604 459 Gene3D Glycogen Phosphorylase B; 252 436 - -
Cca04g01604 459 Gene3D Glycogen Phosphorylase B; 15 448 - -
Cca04g01604 459 CDD GT1_Gtf-like 13 445 IPR002213 GO:0008194
Cca04g01604 459 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 275 389 IPR002213 GO:0008194
Cca04g01604 459 PANTHER GLYCOSYLTRANSFERASE 8 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01604 Cca-Chr4 24301672 24309779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01604 11 452 Glycosyltransferase AT1G05680 47.450 1.10e-145 422