Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01603 ATGGTTACCGACGGAACCAAAAAGGCTCAAGTTTCAGTGCCTCGAAAAATCAACGTGCAGAAATATGCTGAATCCCGTGCCCTAGAGCTTCAGAGTCTTCAATCTATCATAGAGAATAGAGTAAACAATGATTATAGGTCTCAAAGGAACAAGAGAAGAAGAACAACTGCATTTGATAACCAAATTGCGAGAAAGGGAAGCAGAAGAAAGAGGCAGAAACTTGGAATAGTCGATAAAGCCAATGCTGAATTAGGCTTGGAGAAGGATCAACTAAAGAAGCTTCCTCGGCGTGTTCGTCGGAGACTTGAACTGAGGAAAAACCCAGAGAATGGTTTTTGCACTTCTGGGGATGGAACCAAGAGGCTTAGAACTCATATTTGGCATGCAAAGCGGTTCACTATGACCAAGCTTTGGGGTTACTACCTTCCTTTGTGTCTTCAAGGAAGAGGGAAAGGTTCAAGGGCACTCTTGAAGAGGCTCAAACAAGGGGTGCTTGTACATGATGCAAGCTATTATATTGCTATCCAATTGGAGGGTCTAGAGGATTCATTAATGTCAGTACTAAGAATGGTATTGGAGCCTTCTTCGGCAAAAACAACACATTCTGGAAATCATGATGACTCTGTTCTTTCCAGTGTAACCCATGGAAGTGCAATGCTGCATCGAGTTGGAGCACCGGTTTCTCAGCCAATTGCTCCTGTGACCTATATATGGCGACCAACTTCCCAACAAAATATGAATACAGAGCTAGATGGAAGAAATCATCATACTTCTTTTGGACAACATGATATTGGTAATGATTCAGACAAACTTGATGTTGAATTATGTGAAAATTCAAACAAAATGAAGCATGATTGTTCATTTAGACACCTTTGGGTGTGGATACATGCTTCTGCCTTTGAAGAAGGATATGATAGTCTTAAAATCGCTTGCCAGAAAGAGATGGAGAAGAGTGGCATCTCAATTAATTGCTTTTCTCTTGAGGGCCAACTCGCAAAATTAGAATTAATTGGATCAGGGACATTTCAACTTCTTCAAAAGATATTGCATCCTGCTGGAGGTGTTTCAGAGAATCATTGGCAATTAAAGAAGCATGTGGCCATGGAAGAAGACTCTGTTTCTCAGAATAGAAATTCAACCATACTGAAAAATGAGGATCATTTTTCTTCTGGTGCTATGTTATCTCTTCATGTCAAGGATCCTCGAGAATTTCCATGTAACAATAATGTTCCTGTGGAGCCCATTTCAACTAAGTCTTCATGTGATGCACAAGAAACTACATACAAAGAGCTTGCTGAATTGGAAGGAATATTGGAAGAGAATAAAGATTTATCTTCATTGTCACAGGCAAAACTTGAAGACAGCCAGTCTAATATTGATGATCTATGGTATGCTACCACCAGAGGGTTGATGCCCCCAGTGGAAGACAGTGTCCTTTCCAAGGAGAAACACCATGCACGTATGGTTAATTTCTGCCTTGATGATATAGATTCTGGAGAGTCCAACTCTTCAACTAAGGTGCAGTGCTCGAGATCTTGCCCTATTCTTCTTTTAAAAAATGATATGAAGGAATTAAATATAGGATGGTCTGTTATACTTCCCTTAAGTTGGGTCAAAGCCTTCTGGATTCCACTCATCTCTAATGGTGCACATGCAATAGGTTTGCAAGAGAAGCACTGGATTGCATGTGAAATGGGACTGCCATTTTTCCCTTCAGATTTCCCAGATTGTAATGCATACTCTTGCTTCATGGAAGATAAAGCTGATGCATTTAATCGTAAAGCTGAACTTCGTCCTCCTTCCGTAAAGCCTTTGAGAGTTCCCATCCCGCCTCCATGGAGTATTGTTCGCATTACTTTTGACAAAGTGATTGGTGCAATGGAGACTCCTGATCTTTCAACTAGGGAAGATCTAACCAATGCTAATGCATTACCAAACCCTTGCCCTAGAAGCTTAAAAATTTCGAAATGTGACTCTGGGAATAATTCATTTGGTGGAACTGTAGTGAGGACAGGTTGTATGCTGGCTACTTTCCTCGATGAAACTAAAACTGGACAATTGTTATTGTTTCCTTTTGCAGCAGATAAGAATGCTAGAATCTCTAAGTTTATTAACGGCGAACTAAAGCTTGATCCAAGGCATAGATGTGCTGACATTTCTGACCATAAGCTTTGTTTTCTAAGAGTTCATCTTCGTCCATTCAAAGAAGGATGTTTTGAAGAGGGTGCTGTTATTTGTGCACCTTATCCATCTGATATATCTTTATGGACTTCAAGTTCAGAGAAAAGTGAAGAGGGACTTCAAATGTCTCAGTCTGCTATGCAATTATACTTCAAAGAACATTCCTCTGGTATATGGGGAATGCAGATACCAGATGATTCAATTGCTAGCAAGTCTCACCGGTGGCCTATTGGCTTTGTGACAACAGCTTCTGTTCAAGGAAGCAAGAGTCTAGTAGCAGAAGGATTTTGTGAGGCTGTTTTACTAGCTCATTTAAGAGAGGAACAGTGGAAGGAGATGCCTATGAAGCAGAGGAGGAGGGAAATATATGTACTTGTCAGGAATTTAAGATCTACAGCATATAGACTTGCTCTTGCCTCTATTGTTCTTGAATATCAGGAAAATGACATTGGGTTTTTGTAA 2643 0.4033 MVTDGTKKAQVSVPRKINVQKYAESRALELQSLQSIIENRVNNDYRSQRNKRRRTTAFDNQIARKGSRRKRQKLGIVDKANAELGLEKDQLKKLPRRVRRRLELRKNPENGFCTSGDGTKRLRTHIWHAKRFTMTKLWGYYLPLCLQGRGKGSRALLKRLKQGVLVHDASYYIAIQLEGLEDSLMSVLRMVLEPSSAKTTHSGNHDDSVLSSVTHGSAMLHRVGAPVSQPIAPVTYIWRPTSQQNMNTELDGRNHHTSFGQHDIGNDSDKLDVELCENSNKMKHDCSFRHLWVWIHASAFEEGYDSLKIACQKEMEKSGISINCFSLEGQLAKLELIGSGTFQLLQKILHPAGGVSENHWQLKKHVAMEEDSVSQNRNSTILKNEDHFSSGAMLSLHVKDPREFPCNNNVPVEPISTKSSCDAQETTYKELAELEGILEENKDLSSLSQAKLEDSQSNIDDLWYATTRGLMPPVEDSVLSKEKHHARMVNFCLDDIDSGESNSSTKVQCSRSCPILLLKNDMKELNIGWSVILPLSWVKAFWIPLISNGAHAIGLQEKHWIACEMGLPFFPSDFPDCNAYSCFMEDKADAFNRKAELRPPSVKPLRVPIPPPWSIVRITFDKVIGAMETPDLSTREDLTNANALPNPCPRSLKISKCDSGNNSFGGTVVRTGCMLATFLDETKTGQLLLFPFAADKNARISKFINGELKLDPRHRCADISDHKLCFLRVHLRPFKEGCFEEGAVICAPYPSDISLWTSSSEKSEEGLQMSQSAMQLYFKEHSSGIWGMQIPDDSIASKSHRWPIGFVTTASVQGSKSLVAEGFCEAVLLAHLREEQWKEMPMKQRRREIYVLVRNLRSTAYRLALASIVLEYQENDIGFL 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01603 880 PANTHER RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 13 868 - -
Cca04g01603 880 PANTHER RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 13 868 IPR039182 GO:0000172|GO:0001682|GO:0005655
Cca04g01603 880 Pfam Ribonucleases P/MRP protein subunit POP1 41 179 IPR009723 -
Cca04g01603 880 ProSitePatterns Neurotransmitter-gated ion-channels signature. 563 577 IPR018000 -
Cca04g01603 880 Pfam POPLD (NUC188) domain 528 603 IPR012590 -