Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01602 ATGGATGCGGAGTGGTCTGATTCACGATATGATGGTAGAAATGATAAAGATGATTCGCCATTGAGGGAACAATATGATGATGATGGAGCAGATAAATCTAGCAAGCACAGAAGCAAGGATAGGAAGAAGAGTGACAAGGAGCACCGCAGGGAACAGCTGAAGGATGCTTCAAAAGAGGGAAGGGAACGGAAGAAGGAAGATAGGGATGAACGCGAGAAGGACCGGGGCAAAGATAAGGCAAGGGAGAAGGATTATGACAGGGAGAAATACAGGGAGAAGGAACgagagagggatagagataagaaggagcggagtaaggataaagagcgcgaaaaggatacggagagagatagtgaaagagtgcgagagaaggagaggggtaaagagaagagtagggatagggatagggaaagggaaagggaaagggagaaagacagggataaagctaaggaaagggaacgggagaagtatagagaaagagagaaggagagggaaagctatagagatggggacaaggataaggggaaagataaaactagagagaaggagagggagacggatcgagataaagaaaggacaagagatagagtgagcagaaagaCTCCTCATGAGGAGGATTATGAGCTGAATAATGTTGATGATAAAGTAGACTACCATGACAAGAGAGATGAGGAGGTTGGCAAGCAGGTGAAGGATACAAAGCCTGACGAAGATAATCAAGATAGTCAAACATCTGCACATATTTCATCAACAGAACTTGAAGAACGCATCTTGAAGATGAAAGAAGCAAGGACAAAGAAACAACCTGAAGCTGATTCTGAGATCTCAGCATGGGTTAATAAAAGCCGCAAGCTACAAAAGGAAAGAGTATTGCAACTCTCAAAGATTTTTGAGGAGCAGGACAACATTGCAGTAGAGGGAAGCGATGATGAGGATACAACCCAACACACTGATAACCTGGCGGGGGTGAAAGTTCTTCATGGCCTTGATAAAGTTATGGAAGGCGGTACAGTAGTTCTAACTATTAAAGATCAACCGATACTTGCTGATGGTGATGTTAATGAAGATGTTGATATGCTTGAGAATGTGGAAATTGGAGAACAGAAACGAAGAAACGATGCTTATAAAGCTGCAAAAAAGAAAACTGGCGTATATGATGACAAGTTCAATGATGACCCCTCCTTGGAGAAGAAAATACTTCCACATTATGATGATCCAGCTGCAGAAGAGGGTTTAACTTTGGATGAAAAGGGACGAATCTCAGGTGAAGCTGAGAAGAAACTTGAAGAGCTGCGAAGAAGGTTAACAGGTGTTTCTACAAATACCTTTGAAGATCTAACTTCATCTGGAAAGGTATCATCAGATTTCTATACTCATGAAGAAATGCTCAAATTTAAGAAGCCCAAGAAGAAAAAATCCTTGCGAAAGAAAGATAAGCTGGACATCAATGCCCTTGAAGCTGAAGCTGTCTCTTCTGGATTGGGTGTTGGAGATCTTGGTTCTCGGAAAGATATAAGGAGGCAAGCCATCAAAGATGAGCAAGAAAAATTGGAGGCTGAGATGAGAAATAAAGCTTACCAGTCTGCTTATGCTAAAGCAGATGAAGCATCCAAATTGCTACGTCAGGAACAAACTCTCAATGTTAAAACAGAAGAAGATGAAACTCCAGTTTTTGTGGATGATGATGAGGATCTTCGTAAATCCTTAGAGAAAGCAAGAAGATTAGCTCTTAAAAAGCAGAAGGAAGAAGGGGCATCTGGACCTCAAGCAATTGCATTGCTTGCCACTTCAAATCATAATAATGAGACTGATGATCAAAACCCTACAGCTGGAGAGTCACGAGAAAACAAGGTGGTCTTCACAGAGATGGAAGAATTTGTCTGGGGCCTCCACATTGATGAAGAAGCACGAAAACCAGAAAGTGAAGATGTTTTCATGCATGATGATGAAGAGGCTAATGTTCCTGATGAAGAAAAGAGTAATGAGGCTGGTGGCTGGACTGAAGTTCAAGAAACTAATACAGATGAACAACCCAATTCAGAAGACAAAGAGGAAATACTTCCTGATGAAACTATCCATGAAGTTGCTGTGGGGAAAGGGCTGTCAGGTGCTTTGAAACTACTTAAAGACCGTGGAACACTGAAAGAAAGCATTGAATGGGGTGGCAGAAACATGGACAAGAAGAAAAGTAAATTGGTTGGTATTGTAGATGATGAAGAAAAGGAAGCACAGAAGAAAAAGGAGATTCGCATCGAGAGGACAGATGAATTTGGGAGAATTTTGACTCCTAAGGAAGCCTTTCGAATGATTTCTCACAAGTTCCATGGCAAAGGACCTGGAAAAATGAAGCAAGAAAAGCGTATGAAGCAATATCAAGAAGAACTGAAGATGAAGCAGATGAAGAGTTCAGATACACCATCTCTGTCTGTGGAGAGAATGAGGGAAGCTCAAGCTCGTTTGAAGACACCCTATCTTGTTCTTAGCGGTCATGTTAAACCAGGACAAACTAGTGACCCAAAAAGTGGTTTTGCTACTGTTGAGAAGGATCTTCCTGGGGGCTTGACACCTATGCTTGGTGATCGAAAGGTAGAGCATTTTCTGGGAATCAAGAGGAAAGCTGAACCATCGAGCTCTGATACCCCAAAAAAGCCAAAATCTTAG 2661 0.3668 MDAEWSDSRYDGRNDKDDSPLREQYDDDGADKSSKHRSKDRKKSDKEHRREQLKDASKEGRERKKEDRDEREKDRGKDKAREKDYDREKYREKERERDRDKKERSKDKEREKDTERDSERVREKERGKEKSRDRDREREREREKDRDKAKEREREKYREREKERESYRDGDKDKGKDKTREKERETDRDKERTRDRVSRKTPHEEDYELNNVDDKVDYHDKRDEEVGKQVKDTKPDEDNQDSQTSAHISSTELEERILKMKEARTKKQPEADSEISAWVNKSRKLQKERVLQLSKIFEEQDNIAVEGSDDEDTTQHTDNLAGVKVLHGLDKVMEGGTVVLTIKDQPILADGDVNEDVDMLENVEIGEQKRRNDAYKAAKKKTGVYDDKFNDDPSLEKKILPHYDDPAAEEGLTLDEKGRISGEAEKKLEELRRRLTGVSTNTFEDLTSSGKVSSDFYTHEEMLKFKKPKKKKSLRKKDKLDINALEAEAVSSGLGVGDLGSRKDIRRQAIKDEQEKLEAEMRNKAYQSAYAKADEASKLLRQEQTLNVKTEEDETPVFVDDDEDLRKSLEKARRLALKKQKEEGASGPQAIALLATSNHNNETDDQNPTAGESRENKVVFTEMEEFVWGLHIDEEARKPESEDVFMHDDEEANVPDEEKSNEAGGWTEVQETNTDEQPNSEDKEEILPDETIHEVAVGKGLSGALKLLKDRGTLKESIEWGGRNMDKKKSKLVGIVDDEEKEAQKKKEIRIERTDEFGRILTPKEAFRMISHKFHGKGPGKMKQEKRMKQYQEELKMKQMKSSDTPSLSVERMREAQARLKTPYLVLSGHVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRKAEPSSSDTPKKPKS 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01602 886 MobiDBLite consensus disorder prediction 676 690 - -
Cca04g01602 886 MobiDBLite consensus disorder prediction 591 607 - -
Cca04g01602 886 Coils Coil 781 801 - -
Cca04g01602 886 PANTHER U4/U6.U5 TRI-SNRNP-ASSOCIATED PROTEIN 1 177 848 - -
Cca04g01602 886 MobiDBLite consensus disorder prediction 863 886 - -
Cca04g01602 886 MobiDBLite consensus disorder prediction 575 618 - -
Cca04g01602 886 Coils Coil 414 441 - -
Cca04g01602 886 MobiDBLite consensus disorder prediction 632 690 - -
Cca04g01602 886 Pfam SART-1 family 270 744 IPR005011 GO:0000398
Cca04g01602 886 Pfam SART-1 family 745 794 IPR005011 GO:0000398
Cca04g01602 886 PANTHER SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTES 177 848 IPR005011 GO:0000398
Cca04g01602 886 MobiDBLite consensus disorder prediction 1 275 - -
Cca04g01602 886 Coils Coil 140 160 - -
Cca04g01602 886 MobiDBLite consensus disorder prediction 252 271 - -
Cca04g01602 886 MobiDBLite consensus disorder prediction 827 886 - -
Cca04g01602 886 Coils Coil 90 110 - -
Cca04g01602 886 MobiDBLite consensus disorder prediction 1 241 - -
Cca04g01602 886 Coils Coil 507 527 - -