Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01593 ATGTTAGAGCTACCATTCAACATGGCACTTCGGTTCCCCAATTTGGATTTCAAGTTTTTACCCTTTGGTGAGAATCTCAACCCTGAATTGCTAGGTGGTGTAGTTGCTCTTGTCGCCGTTGGCTTCTCAGCTGCTTATCTTTACTATCGCACAAAAAACCCCAAAGGATGCTTGGACCCCAACAATTTCAAAGAATTTAAACTCATAAAGAAGACTCCACTCAGCCACAACGTTGCACGATTCAGATTTGCCCTTCCTACTCCTTCATCAGTATTGGGTCTTCCCGTTGGAAAAAACATACTTGCTAGCAGGGGAAAAGATAGCCAAGGAGAGGAAGTATTGAGATCATATACTCCAATCACATTAGATTCAGATATTGGCTACTTTGAATTGGTTGTGAAGATGTACCCAAATGGAAAGATGTCCCACCATTTTAGACAAATGAAGGAAGGTGATTACTTGGCCGTGAAGGGCCCCAAGGGACGTTTCAGTTACAAACCTGGCCAAGTTAGGGCATTTGGAATGCTTGCTGGAGGTTCAGGCATAACTCCAATGTTTCAGCTCATAAGAGCCATTCTGGAAAACCCGAAGGACAAAACAAAGGTGCACCTCGTTTACGCCAATGTAACAGTGGACGACATTCTGCTAAAGGTAGCCTCGTTACGATTTGTTGCCATTGTTATTAAAATGTTTGATATTTTCCATATGTGGCAGCCTCCTAGAGAATGGAATGGTGGCATTGGTTTTATATCGAAGGAGATTATTAAATCACATTGTCCTGAACCAGCTCCAGATATTCAGATACTTAGGTGCGGTCCACCACCAATGAATAAGGCAATGGCTACTCACCTTGACGCACTTGGCTACACATCAAAGATGCAGTTCGAGTTCTAA 894 0.4295 MLELPFNMALRFPNLDFKFLPFGENLNPELLGGVVALVAVGFSAAYLYYRTKNPKGCLDPNNFKEFKLIKKTPLSHNVARFRFALPTPSSVLGLPVGKNILASRGKDSQGEEVLRSYTPITLDSDIGYFELVVKMYPNGKMSHHFRQMKEGDYLAVKGPKGRFSYKPGQVRAFGMLAGGSGITPMFQLIRAILENPKDKTKVHLVYANVTVDDILLKVASLRFVAIVIKMFDIFHMWQPPREWNGGIGFISKEIIKSHCPEPAPDIQILRCGPPPMNKAMATHLDALGYTSKMQFEF 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01593 297 PRINTS Cytochrome B5 reductase signature 92 103 - -
Cca04g01593 297 PRINTS Cytochrome B5 reductase signature 212 223 - -
Cca04g01593 297 PRINTS Cytochrome B5 reductase signature 151 165 - -
Cca04g01593 297 PRINTS Cytochrome B5 reductase signature 174 193 - -
Cca04g01593 297 PRINTS Cytochrome B5 reductase signature 115 122 - -
Cca04g01593 297 PRINTS Cytochrome B5 reductase signature 267 275 - -
Cca04g01593 297 Gene3D - 155 297 IPR039261 -
Cca04g01593 297 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 61 166 IPR017927 GO:0016491
Cca04g01593 297 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 297 IPR001834 GO:0016491
Cca04g01593 297 CDD cyt_b5_reduct_like 66 297 - -
Cca04g01593 297 Pfam Oxidoreductase FAD-binding domain 66 165 IPR008333 -
Cca04g01593 297 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 297 - -
Cca04g01593 297 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 154 291 IPR039261 -
Cca04g01593 297 SUPERFAMILY Riboflavin synthase domain-like 57 167 IPR017938 -
Cca04g01593 297 Pfam Oxidoreductase NAD-binding domain 175 280 IPR001433 GO:0016491
Cca04g01593 297 Gene3D Translation factors 56 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01593 Cca-Chr4 23941204 23946525 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01593 46 297 NADPH P450 reductases AT5G17770 67.194 3.81e-127 362