Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01498 ATGCCTTCCTCCCCCAAGTCCTTCGCCGCCTCCCACACGCGCCACCCCTTCGCCACCCGCAGATCCACcctcttcctcctcctctccgccctcctcctcctcctcctcGGAATCGCCGCCCTCGCCGCCCAGATTCGCGCCTCCCGCTGCGTCCCCGCGCCGCCCCGATCGGTGCGCGTCGTCTGGGAGCACGCCGGCTCCGGCGCCACCGGCGGAGGCGGCGATGGGGACAGGCACAAGGTGATGGGGTTTGTGGGAATTCAGACCGGGTTCGGATCCACCAGGAGGAGAGAGGCCTTAAGGAAGACGTGGTTTCCCTCTGATCGCCAAGGACTTCAACGGTTGGAAGATGCCACTGGGTTGGCTTTTAGGTTTATCATTGGTAGAACAAGTGATAGATCAAAGATGTCTGCGCTTCAGAAGGAAATAGCAGAATATGATGATTTTATTCAGTTGGATATCCAAGAGGAGTACAGTAAGCTCCCATACAAAACGTTAGCTTTCTTCAAAGCTGCTTATGCACTTTTTGATGCTGAGTTTTATGTCAAAGCTGATGATGACATATATTTAAGGCCAGATCGTCTATCATTACTACTGGCCAAAGAGCGATCTCACCCTCAGACATACATAGGATGCATGAAAAAGGGACCTGTTTTCACTGATCCAAAGCTCAAATGGTATGAGCCACTGTCATATTTGCTTGGAAAGGAGTATTTTCTTCATGCTTATGGTCCAATATATGTTCTTTCGGCTGATGTTGTCTCAAGCTTGGTTGCTCTAAGGAATGACAGTTTTCGGATGTTCAGCAATGAGGATGTTACTATTGGAGCTTGGATGCTTGCGATGAATGTCAATCATGAGAATAACCATGAACTTTGTGCGACAGACTGTACAGCCACATCTATTGCTGTGTGGGATCTTCCTAAGTGTTCAGGCCTCTGTAATCCCGAAAAGAAAATGTTGGAACTCCATCAAAAGGAGACCTGTTCTAAGAGCCCAACTCTGGAATCGGATGATGAATAG 1023 0.4741 MPSSPKSFAASHTRHPFATRRSTLFLLLSALLLLLLGIAALAAQIRASRCVPAPPRSVRVVWEHAGSGATGGGGDGDRHKVMGFVGIQTGFGSTRRREALRKTWFPSDRQGLQRLEDATGLAFRFIIGRTSDRSKMSALQKEIAEYDDFIQLDIQEEYSKLPYKTLAFFKAAYALFDAEFYVKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKWYEPLSYLLGKEYFLHAYGPIYVLSADVVSSLVALRNDSFRMFSNEDVTIGAWMLAMNVNHENNHELCATDCTATSIAVWDLPKCSGLCNPEKKMLELHQKETCSKSPTLESDDE 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01498 340 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 331 IPR002659 GO:0006486|GO:0016020|GO:0016758
Cca04g01498 340 Gene3D - 84 309 - -
Cca04g01498 340 Pfam Galactosyltransferase 95 289 IPR002659 GO:0006486|GO:0016020|GO:0016758
Cca04g01498 340 PANTHER HEXOSYLTRANSFERASE 3 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01498 Cca-Chr4 21207354 21214937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01498 12 340 Glycosyltransferase AT1G53290 70.030 0.0 502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01498 04 21207354 21214937 Cca04g01498 04 21207354 21214937 ECH