Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01417 ATGGCAATTTGTTCCTCACCCTCCTCAtcttcttcttcttcttcttcttcttcttctACGTCGTCGTTTGGTTCTCCCAACAACGCCAAGACCTGGATCATCCATGGCATTGTGGCTGGGGTTGCGATTGCAGCGGCGGTGGGTGCACGCGCCTACATGACCCGATTCAACAAGTTTCGGAGTCGGGTCGTCGGTATCATACCCGCCCGATACGCTTCGTCTCGCTTCCAGGGAAAGCCTCTCGTTGAAATCCTTGGCAAGCCCATGATCCAGAGAACATGGGAAAGGGCAAAGCTGGCTGCTACATTGGATCATGTCGTTGTGGCAACTGATGACGAAAAGATTGCTGACTGCTGTCGACAATTTGGAGCTGATGTTATAATGACATCAGAATCCTGCAGAAATGGTACTGAGCGCTGCAATGAAGCCCTACAAAAGCTTGGGAAAAAATATGATATTGTTGTGAACATTCAGGGTGATGAGCCACTTGTTGAACCTGAGATAATAGATGGTATTGTTAAAGCTTTGCAGGCAGCTCCAGATGCAGTGTTCAGCACTGCAGTCACATCTTTAAAGCCTGAAGATGCACATGATCCAAATAGGGTGAAATGTGTGGTAGATAATCGTGGTTATGCCATCTATTTTTCACGAGGATTAATCCCGTTCAACAAGTCAGGGAAGGTCAATCAACAATTCCCGTATTTGCTTCATCTTGGGATTCAGAGCTATGATACGAAGTTTCTGAAGATATACCCTGATCTTCAACCTACTCCATTGCAACTTGAGGAGGATTTGGAGCAGCTTAAAGTCCTTGAGAATGGCTACAAGATGAAGGTGATAAAAGTTGATCATGAGGCCCATGGTGTTGACACTCCTGAAGATGTTGGAAAGATAGAATCTTTTATGCGTGAGAGGAACTTGTCTTGA 927 0.4455 MAICSSPSSSSSSSSSSSSTSSFGSPNNAKTWIIHGIVAGVAIAAAVGARAYMTRFNKFRSRVVGIIPARYASSRFQGKPLVEILGKPMIQRTWERAKLAATLDHVVVATDDEKIADCCRQFGADVIMTSESCRNGTERCNEALQKLGKKYDIVVNIQGDEPLVEPEIIDGIVKALQAAPDAVFSTAVTSLKPEDAHDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNQQFPYLLHLGIQSYDTKFLKIYPDLQPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDTPEDVGKIESFMRERNLS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01417 308 SUPERFAMILY Nucleotide-diphospho-sugar transferases 63 305 IPR029044 -
Cca04g01417 308 Hamap 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 61 303 IPR004528 GO:0008690
Cca04g01417 308 CDD CMP-KDO-Synthetase 62 301 IPR004528 GO:0008690
Cca04g01417 308 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 53 303 IPR029044 -
Cca04g01417 308 PANTHER 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE 25 308 - -
Cca04g01417 308 TIGRFAM kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 65 295 IPR004528 GO:0008690
Cca04g01417 308 PANTHER BNAA05G35640D PROTEIN 25 308 - -
Cca04g01417 308 MobiDBLite consensus disorder prediction 1 23 - -
Cca04g01417 308 Pfam Cytidylyltransferase 65 275 IPR003329 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01417 04 18725901 18731934 Cca04g01417 04 18725901 18731934 ECH