Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01847 ATGTCCGATTCCGAAATCACACCCCCGCCCCAATCGGAGCAAGACACCGCTCCGCCGCCGCAGCCTGCCCAGGACCAGCCACCACCCTCCGCCGCCAAGCTCGGCCACACTGGCGTCTCCTTCAGCATATGGCCTCCCACTCAGCGCACCCGCGACGCCGTCATCAACCGCCTAATCGAAACCCTATCCACCCCCTCCGTCCTCTCCAAGCGCTACGGGACAATGGCCCCCGACGAGGCCTCCGCCGCCGCGCGCCAGATCGAGGAGGAGGCCTTCGCTGTCGCCGGAGGCTCCACCGCCTCCGACAACGACGGGATCGAGATCCTCCAGGTTTACTCCAAGGAGATCAGCAAACGGATGCTCGACACCGTCAAGGCCAAATCCACTGCCGCTCCCACCGCCGTCGATAACGGCGACGCTCAGACTACTGCCTCCGATCTTGCTCATTCCCCCACCGCAGAGAGCGACACTGCCGCCACCGCCACCACCGAGTCTGAAACCTGA 504 0.6528 MSDSEITPPPQSEQDTAPPPQPAQDQPPPSAAKLGHTGVSFSIWPPTQRTRDAVINRLIETLSTPSVLSKRYGTMAPDEASAAARQIEEEAFAVAGGSTASDNDGIEILQVYSKEISKRMLDTVKAKSTAAPTAVDNGDAQTTASDLAHSPTAESDTAATATTESET 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01847 167 MobiDBLite consensus disorder prediction 12 27 - -
Cca03g01847 167 MobiDBLite consensus disorder prediction 134 167 - -
Cca03g01847 167 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 1 155 - -
Cca03g01847 167 MobiDBLite consensus disorder prediction 1 47 - -
Cca03g01847 167 MobiDBLite consensus disorder prediction 127 167 - -
Cca03g01847 167 Gene3D WPP domain 40 135 IPR038214 -
Cca03g01847 167 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 1 155 IPR044692 GO:0000278|GO:0048527
Cca03g01847 167 Pfam WPP domain 40 131 IPR025265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01847 Cca-Chr3 37815874 37816869 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01847 03 37815874 37816869 Cca03g01847 03 37815874 37816869 ECH
Cca05g00124 05 2802344 2803039 Cca03g01847 03 37815874 37816869 PCT