Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01813 ATGGTGGAAGCCACGTCATCACCTTCGCGGAGACGACCCGCCACACCGACCTCAGCGTCGTCCGGAAAGGTGCTTCTAAGTTCGACAACAACGAGGAGCCTGTCTGTGTCGTTTCAGGGCGAGTCGTTTCGGATCACCGTGAACAAAGCCAAAGCAGCAACCAACGCTGTTTCTGCTCCGAAACCGAGAAACTCACCGTCGCATTCTCCGCGAGGAGGAGTTATAAATAGCAGGGGCCAAGTTTCTTTCACTCGTCCCGCTTCGCCCAACAAGGCTTCCTCCGCAACCAGAGGTTTGAGCCCCTCGCGCCTCAGAAACGGTGCGTCCCCTAACGAGCCTTCTATTTTGAGTTTTGCCGTTGACGTGAAGCGAGGGAGGGTCGGAGAGAACCGAATTGTCGAGGCGCATTCGCTCAGACTTCTCTATAATCGTCTCTTGCAGTGGCGTTTCGTCAATGCCAGAGCATATCTTCACCTCTCTGCACAAAATTCTAACGCTCAGAATTGTCTCTATGGTGCTTGGGCATCCACCACTAAACTACGAGAATCTGTATGTGCCAAAAGGAGGGAGTTACAATTCCTGAAGCATAAGTTGAAGCTCATTTCCATCCTCAAGGAGCAAATGATGTATTTGGAAGATTGGGCTATTCTTGATCAAGTTTACACAAGTTCACTTTCGGGAGCTATTGAAGCACTCAAGGCTAGCACCCTCCGCCTTCCGGTTGTTGATGGGGCCAAGGCAGATGTACTGAAAGTGAAGGATGCTCTTTGTTCAGCGGTGGATGTAATGAAAGCTATGGCATCCTCCATATGCTTATTGTTACCAAAGGTTGTACATGTAAATTCGTTGGTGGTTGAAGTTTCTAACTTGAGTACCAAGGAGCATGCTTTGCTCGATCAGTGGAAAGACCTTTTATCAATGGTTACAGCCATGCAGGTTAGAGAGTGTAGCCTGAGAACGCATCTCACTCAACTTAAATGCTTACATGAAGGCTGA 996 0.491 MVEATSSPSRRRPATPTSASSGKVLLSSTTTRSLSVSFQGESFRITVNKAKAATNAVSAPKPRNSPSHSPRGGVINSRGQVSFTRPASPNKASSATRGLSPSRLRNGASPNEPSILSFAVDVKRGRVGENRIVEAHSLRLLYNRLLQWRFVNARAYLHLSAQNSNAQNCLYGAWASTTKLRESVCAKRRELQFLKHKLKLISILKEQMMYLEDWAILDQVYTSSLSGAIEALKASTLRLPVVDGAKADVLKVKDALCSAVDVMKAMASSICLLLPKVVHVNSLVVEVSNLSTKEHALLDQWKDLLSMVTAMQVRECSLRTHLTQLKCLHEG 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01813 331 MobiDBLite consensus disorder prediction 1 40 - -
Cca03g01813 331 PANTHER QWRF MOTIF-CONTAINING PROTEIN 9 7 55 - -
Cca03g01813 331 PANTHER QWRF MOTIF-CONTAINING PROTEIN 9 58 328 - -
Cca03g01813 331 Pfam QWRF family 5 299 IPR007573 -
Cca03g01813 331 MobiDBLite consensus disorder prediction 53 110 - -
Cca03g01813 331 PANTHER AUGMIN FAMILY MEMBER 58 328 - -
Cca03g01813 331 PANTHER AUGMIN FAMILY MEMBER 7 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01813 Cca-Chr3 37349432 37352580 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01813 03 37349432 37352580 Cca03g01813 03 37349432 37352580 ECH
Cca05g00105 05 2505013 2510942 Cca03g01813 03 37349432 37352580 PCT