Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00952 ATGGCCTTGTCAAGCCCTCAGATACAACGATTCCTCTTGAGTAAGCTTCATGGCCGCTCCATCTCCAAGAACACACCGAGAAATGTTTTTGCCATCACAAGCAGAAGTGGGTGCTGTTCTGCCATAGCCATTGATGCCCCATCGTCGTCTTTGACTGAGGTGCCCGGCATAAGATGGGGGTCCATAGCCTTGCAGGGTCTCCGTGAAGAGATGGAAGATGATATTATTGTGAGACCCGCTGGCCTTCAAGGCTTCTCTTTTGCAGCTGTCTTTGATGGCCATGGAGGCTTTTCTTCGGTCGAGTTCCTCAGTGCCAACTACAGGGATGAGCTATACAAGGAGTGTGTTGAAGCTTTACAAGGTGGATTACTATTAGTTGAGAAAGATTTCAAAGCCATTAAAGGAGCATTACAGGATGCATTTCTCAAGGCTGATATGAAGTTATTAAAACGGCTTGAAATAAAGGAAGAGGAGGACGAATCAGGTGCTACAGCAACTGCCATGTTCGTTGGAGATGATGAGCTGCTAATTTCACATATTGGTGACTCATCTGTGGTTCTATGCAGATCTGGGAAAGCAGAAGTACTGACTAGTCCTCACCGTCCATACGGGAACAACAAGACTTCTCTTGAAGAAATTAAAAGAATCAGAGAAGCAGGTGGATGGATTAGCAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGACATGCGATTCAAAACAAAGAAGAATGAGATGCTGCAAAAAGGAGTTCAGGAAGGAAGATGGTCAGCAAAGTTTATTTCTCGTGTACAGCTCAACAATGACTTGATTGTTGCATACCCTGATATTTATCAAGTAGCTCTTGGCTCAGATGCTGAATTTGTAGTATTAGCATCCGATGGCTTATGGGATTACATGAACAGCTCAGAAGCAGTTTCATTAGTGAGGGATCAACTACGAAAACACGGAAACATTCAGCTAGCATGTGAAGCACTTGCACAAGCCGCTTTGGACCGACGTACACAGGATAATGTCAGTATTATAATTGCCGATTTAGGGCGGACAGACTGGCAAAATGTTCCACTGCAGCAACAAAATGTTATATTTGAGCTGGCTCAAGCTCTTGTTACCATTGGAATTGTGTCTATTGGAATCTGGTTTTCATCGCAGCTTTCCTTATAG 1176 0.4405 MALSSPQIQRFLLSKLHGRSISKNTPRNVFAITSRSGCCSAIAIDAPSSSLTEVPGIRWGSIALQGLREEMEDDIIVRPAGLQGFSFAAVFDGHGGFSSVEFLSANYRDELYKECVEALQGGLLLVEKDFKAIKGALQDAFLKADMKLLKRLEIKEEEDESGATATAMFVGDDELLISHIGDSSVVLCRSGKAEVLTSPHRPYGNNKTSLEEIKRIREAGGWISNGRICGDIAVSRAFGDMRFKTKKNEMLQKGVQEGRWSAKFISRVQLNNDLIVAYPDIYQVALGSDAEFVVLASDGLWDYMNSSEAVSLVRDQLRKHGNIQLACEALAQAALDRRTQDNVSIIIADLGRTDWQNVPLQQQNVIFELAQALVTIGIVSIGIWFSSQLSL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00952 391 ProSiteProfiles PPM-type phosphatase domain profile. 58 350 IPR001932 -
Cca03g00952 391 CDD PP2Cc 57 350 IPR001932 -
Cca03g00952 391 Pfam Protein phosphatase 2C 60 343 IPR001932 -
Cca03g00952 391 PANTHER PROTEIN PHOSPHATASE 2C 57 6 387 - -
Cca03g00952 391 SUPERFAMILY PP2C-like 51 351 IPR036457 -
Cca03g00952 391 PANTHER PROTEIN PHOSPHATASE 2C 6 387 IPR015655 GO:0004722|GO:0006470
Cca03g00952 391 Gene3D - 57 357 IPR036457 -
Cca03g00952 391 SMART PP2C_4 48 348 IPR001932 -
Cca03g00952 391 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00952 Cca-Chr3 23577900 23585173 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00952 03 23577900 23585173 Cca05g00226 05 4804657 4806691 PCT