Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00693 ATGGTACCGTATTTTGGAAGGCTGGGTGGTGGCCCATCCGGTGCAGACACAGGGTCGTTTCGGTCAATTAGCTTCCAACAAAAAAATATTAGAAAAATGGCAGATAGCGATACGCCTCGGATATTTGTCACTCACAACACTCTTCTTCCTCTCTTCCTCTTCACACCATTCCCCAAACCTCCTTCCTTAACCTTCACACACCAAAAACAACTCTCTTTCTCTCCTTCCCAATTTCACCCGGAAATGCAGGAAATACATTCCCTCGGCGGCACCAGGTTCTTcggcggcggcggcggcggcggtggcggagaccgcaggctgaggccgcaccaccacaaccaccaccaGCCGCTCAAGTGCCCTCGCTGCGACTCCCTCAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccgccgccgccgccaccagcaacaacaacaacaacaacaacaacgcttcctcttccgctccggccaccgcgtcgtccactccgccgccgGAGGCGAACTCCAACTCCCACTCCAGCAGCGAAAGCTCCACCCTAACCGTTGCCGCCACGGAGGCGATGTCGGCGCCGACATCAAACGTTGCGTCCAACAGCGGTTTCCTTCTGGACAACGTTCGCGACTCGAAGATGTTCGGTAACGCTAACAACCTCTCTTTGGAAAGTGGTTCCATTTTCTCGGAGATTGGAAGCTTCACTAGCCTCATGGCTTCAAATAACGAAGCATTGGGGTTTGGGTTTGGGAATAGTaataataataacaacaacaacgacaccagcaacagcaacaTCCTCGACGCGACGTCTTTACGGTTCGGGGTTTCTCAGCCGGATGGGAGTGATCAGGTGCATGTGGCACCAGGTGGAGAGCATGGTCAGTGGCAAGCGCAGAGTCATCAGGAGTTTGGTACGGCGTCGTTTCTCGATCACGCGGTGCCGCAGCTTGAGTTTTCGTCGATGCAGCATAAGAGTGGATTTGGATCGTTGGATTGGCAACCCGGTGCGGATCAAGGTTTGTTTGACCTTCCTAACACCGTTGATCAACCTTACTGGGCCCACCACACTCATTGGTCTGATCAAGATAACCCTTCTCTCTTCCATCTTCCCTGA 1428 0.3235 MVPYFGRLGGGPSGADTGSFRSISFQQKNIRKMADSDTPRIFVTHNTLLPLFLFTPFPKPPSLTFTHQKQLSFSPSQFHPEMQEIHSLGGTRFFGGGGGGGGGDRRLRPHHHNHHQPLKCPRCDSLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAATSNNNNNNNNASSSAPATASSTPPPEANSNSHSSSESSTLTVAATEAMSAPTSNVASNSGFLLDNVRDSKMFGNANNLSLESGSIFSEIGSFTSLMASNNEALGFGFGNSNNNNNNNDTSNSNILDATSLRFGVSQPDGSDQVHVAPGGEHGQWQAQSHQEFGTASFLDHAVPQLEFSSMQHKSGFGSLDWQPGADQGLFDLPNTVDQPYWAHHTHWSDQDNPSLFHLP 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00693 475 MobiDBLite consensus disorder prediction 244 292 - -
Cca03g00693 475 MobiDBLite consensus disorder prediction 89 115 - -
Cca03g00693 475 MobiDBLite consensus disorder prediction 241 292 - -
Cca03g00693 475 Coils Coil 123 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00693 Cca-Chr3 12777917 12779344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00693 306 472 C2C2-Dof Transcription Factor Family AT5G60850 32.584 1.32e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00693 - - gmx:778116 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02050 11 46046471 46047521 Cca03g00693 03 12777917 12779344 PCT