Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00605 atgaAGAGGCACTGGCGCAATAGGAGTCACGACGACGGAACCCTCCCAGATTCCGATTCCGATTCCGACACGCGCTCCAACCGGAGATTCCCCCTCACGCGCCTAATGGCCctctttctcttttctctctttctcttctctctcaccttcattcttcctcACCCTCACATCCAATCATCTCAAACTGCAAAATCTCTTCTCCAACTCAAGCAAACTCACCAAGGTGACACATCTGAATCTGTTGAGTTGTTAAAAGATAAGCTACTTGGTGGCCTTATAGCAGATGGATTTGATGAAAAATCTTGTCGAAGCAGGTATGATTCACTTACATATGGCAAACGACTATCAGGAAATCCTTCTTCTTACCTTGTTTCTAGATTGAGAAAATATGAAGCTCTTCACAAAGAATGTGGACCTTATACTGAATCATATAATAGAACAGTGAGAGATCTCAGGTCTGGTCATGTAAGTGAGTCCTCAGCATGTAAATATGTGGTCTGGATTTCGTATAGTGGGTTAGGGAATAGGATATTGACCTTAGCTTCCACGTTTCTGTATGCTCTCCTCACGGATCGCGTTCTATTAGTTGATCCTGGAGTTGATATGGTGGATCTTTTTTGTGAACCATTTCCACATGTTTCATGGTTTCTCCCTCCTGATTTTCCTCTCAATAGTCAATTTCCTAATTTGGGTCAGAAATCTGATCAGTGTTATGGGAAAATGCTGAAAAACAAATCAATCACAGACTCCATGGTGGTGCCATCTTTTCTCTACCTTCATCTAGTCCATGATTACGATGATCAGGACAAACTTTTCTTCTGTGACGGAGACCAAACTTTTCTTCAGAAAGTACCATGGTTATTGGTGAAAACAGATAATTACTTTGTCCCATCTCTATTCTTGATGCCATCTTTTGAGCAGGAACTGAATAATCTCTTCCCAAACAAGGAAACAGTTTTTCATTTCCTGGGTAGGTATTTGTTCCACCCCACAAACAAAGTATGGGGACTTGTTAGCAGATACTATCAAGCTTATTTAGCTAATGCTGATCAAAGAGTAGGCATCCAGATAAGAGTGTTTGACTCTGAAACTGGTCCATTTCAACATGTATTGGATCAAATCTTAGCTTGTACTTTGAAGGCGAATCTTTTGTCTGATGTTAACCGGGCCGGAAATATTGTTAATTCATCAGGAAAGCCAAAGTCAAAAGCTGTGCTGATGACATCCTTGAGCTCTGGTTATTTTGAAAAAGTGAGAGACATGTATTGGGAATATCCAACTGTGACAGGAGAAATTGTTGGCATTTACCAACCAAGCCATGAAGGGTATCAACAAACAGAGAAGCAGTTGCACAACCAGAAAGCTTGGGCAGAAATGTATCTCTTGAGCTTGACCGATGAGTTGGTAACAAGCTCTTGGTCTACTTTTGGCTACGTGTCACAGGGGCTCGGAGGTTTGAAACCGTGGATACTGTACAAACCTGAGAATAGAACAGCTCCTGATCCTCCTTGTCAACGTGCCATGTCGACGGAGCCATGCTTCCATGCTCCTCCCTTCTATGATTGTAAGGCTAAGAGAGGAATTGATACTGGTGCACTTGTTCCACATGTAAGGCACTGTGAGGATATGAGCTGGGGTCTTAAGCTTGTAGACAAATATAGTTGGCAATAA 1671 0.4087 MKRHWRNRSHDDGTLPDSDSDSDTRSNRRFPLTRLMALFLFSLFLFSLTFILPHPHIQSSQTAKSLLQLKQTHQGDTSESVELLKDKLLGGLIADGFDEKSCRSRYDSLTYGKRLSGNPSSYLVSRLRKYEALHKECGPYTESYNRTVRDLRSGHVSESSACKYVVWISYSGLGNRILTLASTFLYALLTDRVLLVDPGVDMVDLFCEPFPHVSWFLPPDFPLNSQFPNLGQKSDQCYGKMLKNKSITDSMVVPSFLYLHLVHDYDDQDKLFFCDGDQTFLQKVPWLLVKTDNYFVPSLFLMPSFEQELNNLFPNKETVFHFLGRYLFHPTNKVWGLVSRYYQAYLANADQRVGIQIRVFDSETGPFQHVLDQILACTLKANLLSDVNRAGNIVNSSGKPKSKAVLMTSLSSGYFEKVRDMYWEYPTVTGEIVGIYQPSHEGYQQTEKQLHNQKAWAEMYLLSLTDELVTSSWSTFGYVSQGLGGLKPWILYKPENRTAPDPPCQRAMSTEPCFHAPPFYDCKAKRGIDTGALVPHVRHCEDMSWGLKLVDKYSWQ 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00605 556 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 1 556 - -
Cca03g00605 556 MobiDBLite consensus disorder prediction 7 26 - -
Cca03g00605 556 PANTHER FUCOSYLTRANSFERASE 2-RELATED 1 556 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cca03g00605 556 MobiDBLite consensus disorder prediction 1 26 - -
Cca03g00605 556 Pfam Xyloglucan fucosyltransferase 65 523 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cca03g00605 556 Gene3D - 159 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00605 Cca-Chr3 10534344 10537262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00605 26 550 Xyloglucan Fucosyltransferase1 AT2G03220 63.636 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00605 K13681 - gmx:100800258 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00605 03 10534344 10537262 Cca03g00605 03 10534344 10537262 ECH