Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02700 ATGGACTCCTCAAACTCTTCGTTTTCCAGCTTCCGCGCCTACCTCCGCGCCCTCTCCCACACCCCCACGCGCCTCGCCCGACGCGCCCTCTCCGTCTCCACCTGCTACGATGAGGTTAGCCACGTGCGAGCCCGCTCTGGCCCCACCATGCGCAAGACCCTCCGCTGCTTCGACCTCGTCTCCCTCGGCATCGGCGGAATGGTTGGCGCCGGCGTCTTCGTCACCACCGGAAACGCCACCCGCCACTACGCCGGCCCCGCCGTCCTCCTCTCCTACGCCATTGCCGGCTTCTGCGCCCTCCTCTCCGCCTTCTGCTACACCGAGTTCGCCGTCGACATGCCGGTCGCCGGCGGCGCCTTCAGCTACCTCCGCGTCACTTTCGGCGAATTCGCTGCATTTCTTACCGGCGCAAACCTCGTGGTGGACTACGTCTTGTCGAATGCCGCCGTTGCCAGAGGCTTCACCGCGTACCTCGGCGCCGCCATTGGAATCTCCTCCGCTAAATGGCGCCTCATCGTTCCTTCTCTTCCCAAAGGCTTTAACGAGATCGACATCGTGGCCGTGGCTGTCGTTTTGCTGATCACCCTCGTCATCTGCTACAGTACGAGAGAGAGTTCTGTGGTGAACATGATACTGACGGCGCTGCACATATTGTTCATTGTGTTTGTGATAACAATAGGCTTCTGGAGAGGGAGTTGGAAAAACTTTACGCATGCCGCTAACCCGGAAAACCCCTCCGGTTTCTTCCCATACGGTGCTGCTGGAGTTTTCAAAGGTGCAGCCGCCGTTTACTTAAGTTATATTGGCTACGACGCCGTTTCGACTATGGCGGAGGAAGTCAAAGACCCTGTGAAGGATATTCCCATCGGTGTCTCCGGTTCCGTGGTTATTGTTACGGTTCTCTACTGTCTTATGGCCGCTTCCATGACCAAACTTCTTCCTTACGACATGATCGATGCAGAAGCACCGTTTTCGGCGGCGTTCAGTGGAAAATCGGACGGTTGGGGATGGGTGTCTCGAGTGATAGGAGTGGGGGCCAGCTTCGGGATACTGACGTCGCTGTTGGTGGCGATGTTGGGTCAGGCTCGATACATGTGCGTCATAGGCCGTTCCAATGTGGTCCCATCTTGGTTCGCTAGGGTCCACCCCAAGACCTCTACCCCTGTCAACGCCTCAGCTTTTCTTGGAATCTTCACAGCGGCAATAGCCCTTTTCACTGATCTTGATGTCCTCCTCAATCTGGTGTCCATTGGTACCCTATTTGTCTTTTACATGGTGGCAAATGCCGTGATCTATAGACGTTATGTGGCTACTGGGACAACGAATCCATGGCCTACATTGTCCTTCCTCTGCTCATTTTCCTTTACCGCTATCATGTTCACCCTTATTTGGAAATTTGTACCCACAGGAGGGGCAAAAGCAGGGATGCTGAGTGCCAGTGGTCTTGTTGCGATTGCAATATTACAACTTTTCCATTGCATGGTCCCTCAGGTTCGAAAGCCAGAATTCTGGGGTGTCCCATTCATGCCCTGGATACCCTCTATTTCAATCTTTCTCAATGTGTTTCTGTTGGGATCACTGGATGGGCCATCCTATGTTCGATTTGGATTCTTTTCGGCTGTTGCGGTGCTTTTCTATGTCTTGTACAGTGTTCATGCTAGCTTTGATGCCGAAGGAGATAGTTCTTTGACTGGAAAGAATGGAGAAGTCCACGTGGAATCAAAAGAAATTGAGGACCAAAGTTTCAAAGTGTAG 1755 0.5373 MDSSNSSFSSFRAYLRALSHTPTRLARRALSVSTCYDEVSHVRARSGPTMRKTLRCFDLVSLGIGGMVGAGVFVTTGNATRHYAGPAVLLSYAIAGFCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFLTGANLVVDYVLSNAAVARGFTAYLGAAIGISSAKWRLIVPSLPKGFNEIDIVAVAVVLLITLVICYSTRESSVVNMILTALHILFIVFVITIGFWRGSWKNFTHAANPENPSGFFPYGAAGVFKGAAAVYLSYIGYDAVSTMAEEVKDPVKDIPIGVSGSVVIVTVLYCLMAASMTKLLPYDMIDAEAPFSAAFSGKSDGWGWVSRVIGVGASFGILTSLLVAMLGQARYMCVIGRSNVVPSWFARVHPKTSTPVNASAFLGIFTAAIALFTDLDVLLNLVSIGTLFVFYMVANAVIYRRYVATGTTNPWPTLSFLCSFSFTAIMFTLIWKFVPTGGAKAGMLSASGLVAIAILQLFHCMVPQVRKPEFWGVPFMPWIPSISIFLNVFLLGSLDGPSYVRFGFFSAVAVLFYVLYSVHASFDAEGDSSLTGKNGEVHVESKEIEDQSFKV 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02700 584 Pfam C-terminus of AA_permease 504 554 IPR029485 -
Cca02g02700 584 Gene3D Amino acid/polyamine transporter I 49 488 - -
Cca02g02700 584 PANTHER AMINO ACID/POLYAMINE TRANSPORTER I, CATIONIC AMINO ACID TRANSPORTER-RELATED 5 571 - -
Cca02g02700 584 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 5 571 - -
Cca02g02700 584 Pfam Amino acid permease 57 479 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02700 Cca-Chr2 48395143 48398953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02700 141 569 Organic Solute Cotransporters AT3G10600 75.991 0.0 669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02700 02 48395143 48398953 Cca02g02700 02 48395143 48398953 ECH