Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02684 ATGAGCTCAATCGCTCAGGGTTTCACCAAGTCGCTGGCCATGACCATTCTCTCTGAGATCGGCGACAAAACTTTCTTTGCAGCTGCGATACTGGCTATGCGACACCCACGACGCCTAGTTTTATCAGGTTGCTTGTCAGCTTTGATTGTGATGACCATTCTCTCTGTTCTTGTTGGTTGGGCTGCTCCGAATCTGATCTCTCGTACATGGACTCATCACATTACAACATTGTTATTCTTTGGCTTTGGACTTTGGTCCATAAAAGATGCAATATTTGAACAAGGGGATACTGAAGAATTTGCTGAAGTTGAAGCTAAATTGGATAAAGACTGGAAGGCTAACAATGGAGCTTCAAAAAATAGCAATAAGGTTGATGATGCCGCCAAAAAGCATAAACGGTCGTTTTTATTTCAATTTTTTTCTCCTATTTTTATACAGGCATTTTCTATCACCTTTTTTGGTGAATGGGGTGACAAGAGCCAGCTAGCTACCGTAGGTTTGGCTGCAGATGAGAACCCATTTGGTGTGGTTCTTGGAGGGATTCTGGGTCAAGCATTGTGCACTGCTGCTGCTGTTGTTGGAGGGAAGAGTTTAGCCTCTCAGATATCTGAAAAAATTGTTGCACTCTCAGGCTGTACAATTGAGGGGATGGAAAGCCTTTCCTTCATTGGAGCTGTAATTCAAACGGAGACTGGTAGGATGTCACAACTCATTATGCTGATCTTTAGTTTAGCAAGTAGCAGTTTCGCACTGTTTCCCCCTAAAGTGTCAAGTACCATTGTTCAAGTTTTGCTTGATCTTGACCCTGATAATTTCAACGATAACAAGCTTAAAATCCTAGTTAACCGCCTCACCCCAAAATCAAAACTCTTTATGTTCGATGTTCATGAAGTTAGTGACGGTGACCTGCCATGA 915 0.4251 MSSIAQGFTKSLAMTILSEIGDKTFFAAAILAMRHPRRLVLSGCLSALIVMTILSVLVGWAAPNLISRTWTHHITTLLFFGFGLWSIKDAIFEQGDTEEFAEVEAKLDKDWKANNGASKNSNKVDDAAKKHKRSFLFQFFSPIFIQAFSITFFGEWGDKSQLATVGLAADENPFGVVLGGILGQALCTAAAVVGGKSLASQISEKIVALSGCTIEGMESLSFIGAVIQTETGRMSQLIMLIFSLASSSFALFPPKVSSTIVQVLLDLDPDNFNDNKLKILVNRLTPKSKLFMFDVHEVSDGDLP 304
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02684 304 Pfam Uncharacterized protein family UPF0016 10 83 IPR001727 -
Cca02g02684 304 Pfam Uncharacterized protein family UPF0016 145 211 IPR001727 -
Cca02g02684 304 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 3 241 IPR001727 -
Cca02g02684 304 PANTHER GDT1 FAMILY PROTEIN 3 241 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca02g02684 Cca-Chr2 48213341 48217466 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02684 02 48213341 48217466 Cca02g02684 02 48213341 48217466 ECH