Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02680 ATGACAAGAAAAATAATGGCTACTCTTACCTCAAATCTAAGCCTTAGCCCACAATACACTGTCCCCAAAGACTATCCACCCCATGGTTCTATAGTTGAGGAAATACAAGGTCTTATTAGAGTACACAAAGATGGATACGTGGAACGACCTCAAGTTGTTCCATGTGTCACTGCTAGTGCTTTGAGTCCTGACCTAAATAATGTGACATCTAGAGACATGGTCATAGACAGTGTCACAAACACATGGGCACGTTTTTATGTTCCAACTAGCCAACACAAGTTACCATTGCTAGTTTATTTTCACGGTGGAGGCTTTTGTGTTGGTTCTGCAGCTTGGAGTTGCTACCACGATTTCCTTGCAAGGCTATCATCGAAAGTGGGGTGTGTGATCATGTCAGTGGACTATCGATTGGCCCCAGAGAACCCTCTCCCAGCACCCTATGATGATGGACTAAAGGCCCTAATGTGGGTGAAACAACAAGTGCTGCATCAGCAACAGAATAGTGAATGGTGGAGCACAAAGTGCAACTTTTCTAGTGTCTTCTTAGCGGGGGACAGTGCGGGTGCTAACATAGCATACAACGTGGCCACGAGGATATCTGCATGTGATGATGGTGCTGCTTTGAGGCCTTTGAATTTGAAGGGTCTTATTTTGATACAACCCTTTTTCGGTGGGGAAGTGAGGACACGTTCCGAGAAGTGCATGGCTCAACCCAAAGGTTCTGCTTTGAACATGGAAGCGTCTGATACCTATTGGCGCTTGGCGTTACCTTATGGTGAGAACCGTGACCATCCTTGGTGCAACCCTTTGGTGAAATTGGAGGACTTGAAGGTGTTGCGTACGTTGGTGTGCATCTCGGAGATGGACATATTGAGGGATAGGAATTTGGAGTTTTGTGAGGCTTTGATGAGGGCAGGGAAAAGGGTTGAGTATGGGGTGTTCGGTGGTGTTGGACATGCATTTCAGATTCTAAGTAAGTCTCAGCTCTCTAAGAGTAGGACCAAGGAAATGATGGCTCGTGTTAAGTCCTTCATGGGTGTCTGA 1044 0.4617 MTRKIMATLTSNLSLSPQYTVPKDYPPHGSIVEEIQGLIRVHKDGYVERPQVVPCVTASALSPDLNNVTSRDMVIDSVTNTWARFYVPTSQHKLPLLVYFHGGGFCVGSAAWSCYHDFLARLSSKVGCVIMSVDYRLAPENPLPAPYDDGLKALMWVKQQVLHQQQNSEWWSTKCNFSSVFLAGDSAGANIAYNVATRISACDDGAALRPLNLKGLILIQPFFGGEVRTRSEKCMAQPKGSALNMEASDTYWRLALPYGENRDHPWCNPLVKLEDLKVLRTLVCISEMDILRDRNLEFCEALMRAGKRVEYGVFGGVGHAFQILSKSQLSKSRTKEMMARVKSFMGV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02680 347 PANTHER CARBOXYLESTERASE 6-RELATED 17 345 - -
Cca02g02680 347 SUPERFAMILY alpha/beta-Hydrolases 25 345 IPR029058 -
Cca02g02680 347 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 180 192 IPR033140 -
Cca02g02680 347 Gene3D alpha/beta hydrolase 36 346 IPR029058 -
Cca02g02680 347 PANTHER ARYLACETAMIDE DEACETYLASE 17 345 - -
Cca02g02680 347 Pfam alpha/beta hydrolase fold 97 322 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02680 Cca-Chr2 48176935 48178183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02680 28 345 Carbohydrate Esterase AT5G16080 54.489 3.50e-120 348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02680 02 48176935 48178183 Cca02g02680 02 48176935 48178183 ECH